Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0607 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATACAATGAAGCTGTTAAACTCTCTGATGATATCAGTGGCATGATTTCTGAGCGGAATTCATTTCCTGCATCTGGACCAGAAACCCAGCGCCATGCATCTGCTATACGAAGGAAGATTACGATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTCTATCAAAGAACCCTGGAAAATCTGAGAAGGATATGAATCGTCGCAAGGACACCCTTCAAAATTTAAGATCGAAAGTCAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGATATAAAATCAGATGCAATGAGCAGAACGGTTGGCCTGGACAACAGTGGACTTGTTGGACTTCAACGGCAAATTATGAAAGAGCAAGATGAAGGCCTTGAGAAATTGGAGGAGACTGTAATAAGTACGAAACATATTGCACTGGCAGTGAATGAAGAGCTGGGTTTACACACGAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAGAAGAACTTGGCCGTTTTGAACAAACGTACAAAAGGTGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTGGTTGGTATAGTTGTCTTGGTTCTTGTCATATGGCTGTTGGTCAAATATTTGTAA 690 0.4232 MASSSDSWMKEYNEAVKLSDDISGMISERNSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKNPGKSEKDMNRRKDTLQNLRSKVNQMASTLNMSNFANRDSLLGPDIKSDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVISTKHIALAVNEELGLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVVLVLVIWLLVKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0607 229 SMART tSNARE_6 128 195 IPR000727 -
Lan19g0607 229 Pfam SNARE domain 170 221 IPR000727 -
Lan19g0607 229 Gene3D - 135 197 - -
Lan19g0607 229 PANTHER SYNTAXIN 1 223 IPR045242 -
Lan19g0607 229 CDD SNARE_Qc 136 193 - -
Lan19g0607 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Lan19g0607 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
Lan19g0607 229 SUPERFAMILY SNARE fusion complex 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0607 Lan-Chr19 11376990 11380857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0607 1 229 SNARE and Associated Proteins AT1G79590 74.678 8.99e-122 345