Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0601 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACTGAAGATGAAATCTTGAAAGCAGCTGTTATGAAATATGGAAAAAATCAATGGGCTCGAATCTCTTCTCTCCTTGTTCGTAAATCTGCTAAACAATGTAAAGCTCGCTGGTACGAGTGGCTCGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAGAAACTCCTTCATCTTGCTAAGCTGATGCCAACACAGTGGAGAACTATTGCTCCCATTGTTGGCCGTACACCATCCCAGTGCCTTGAACGTTACGAGAAACTCCTTGATGCAGCCTGTGTTAAGGATGATAATTATGAACCTGCTGACGACCCACGCAAATTGCGTCCAGGTGAGATTGATCCAAACCCTGAGTCTAAGCCTGCAAGGCCCGACCCCGTTGACATGGACGAGGATGAGAAGGAGATGCTTTCCGAAGCACGAGCTAGGTTAGCCAACACCAAAGGAAAGAAGGCCAAAAGGAAAGCCAGAGAGAAGCAGCTTGAAGAAGCCAGGAGACTTGCTTCTTTGCAGAAAAAGAGAGAACTTAAGGCTGCTGGAATTGATATCAGGCAGCGCAGGAGGAAAAGGAAAGGTATAGACTATAATGCCGAAATTCCATTTGAAAAGAGACCTCCTCCTGGGTTTTTTGATGTTGCTGATGAGGATAGACCCATTGAACAACCTAATTTCCCTACTACAATTCAGGAACTTGAGGGAAAAAGAAGGGTTGACGTTGAAGCACAATTAAGAAAGCAAGACATTGCAAAGAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCTATTTTGCATGCTAACAAAATGAACGACCCAGAAACGGTTAGGAAGAGATCTAAACTGATGCTTCCGCCACCCCAGATATCCGACCATGAATTGGATGAAATTGCAAAGTTGGGTTATGCCAGTGACCAAGCAGGGATTGAGGAACTTGGAGAAGGTAGTAGTGCTACACGCGCTCTTCTGGCTAATTATGCACAGACGCCTGGCCAAGGAATGACACCTTTAAGAACCCCTCAGAGAACACCAGCTGGTAAGGGAGATGCTATCATGATGGAAGCTGAAAACCTGGCTAGGTTGAGGGAGTCTCAGACGCCATTGCTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCCAAGAGAAAGGAAATTCAGACTCCAAACCCGGTGCTGACTCCCTCTGCAACTCCTGGAGGGACACCAAGCCTTACTCCTAGAAGTGGTATGACACCAGCAAGGGATGGTTTTTCTTTTGGCATGACTCCTAGGGGAACTCCTCTCAGGGATGAGCTACATATTAATGAGGACGTGGATATGAATGACAGTGCTAAGCTGGAGCTACGAAGACAAGCGGATCTGAGAAGAAGTTTGCGCTCTAGTTTAAGCAGCATTCCACAGCCCAAAAATGAGTACCAGGTAGTGATGCAACCAGTTCCAGAAGATGCTGAAGAATCTGAGGAGAAGATTGAAGAGGACATGTCTGATAGAGTAGCTAGAGAAAAGGCAGAAGAAGAGGCGCGGTTGCAGGCACTACTTCGAAAACGATCAAAAGTCCTTCAAAGGGGACTTCCCAGGCCTCCATCTGCATCTTTGGAGCTCATTAAAAATTCCTCGATGAGAGCCGACGAGGACAAGAGTTCCTTTGTTCCACCAACCTCAATTGAGCAAGCTGATGAGCTGATAAGAAAGGAGCTTCTAACATTACTGGAGCATGACAATGCGAAGTATCCACTTGATGAGAATAAAGAGAAAAAGAAAGGAGCCAAGCGTTCAGCAAACATGCCTGCTGTCCCTGTTATAGAAGATTTTCAGGAATTTGAGATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCCCAGTATCTTCGCGGGGCAATGGGGCATGAGAGTGAATCCCTTGATAAATTTGTTGAAGCACATACAACTTGCATTAATGATCTTATGTACTTTGCCACCCGTAATGGCTATGGTCTATCCAGTGTTGCTGGAAACATGGAGAAGCTAGCAGCTTTACAGAATGAATTTGAGAATGTGAGAAGCAAGTTGGATGACGGTAAGGAGAAGGTAATACGCCTTGAAAAGAAGGTGATGGTTCTTACACAAGGCTATGAGACTAGGGCAAAGAAAAGTCTTTGGCCACAAATTGAGGCTACTTTCAAGCTGATGGATGTAGCGGCAACAGAATTGGAGTGCTTCCAAGCTTTACAAAAGCAAGAGCAATTAGCAGCATCCCACAGGATAAACAATGTGTGGGGTGAAGTACAAAGGCAAAAGGAACTTGAGAAAACTCTACAAAAGAGATATGGAGATCTTGTAGCTGAGCTTGAAAGGGTACAAAATTTCATGAACCAGTACAGGGTTAAATCACAACAAGAAGAAATCGAAGCAAAGAATCGTGAGCTTGAGTCTACTGATGACACAGTTGAAGTTAATGTTCAGGGTAGCGAGAATGGAAGTGCTGTATCAGTTTATCCATCTCATGATGAAACTACTGACCAACAAGTAGACATTGTGCAAGATCAAGCCACCTCTACCTTCAAAATTAATGATATGGGTGTGGAATCCTGTGAAGAGCAAACAAAACACGACACTGATGTTAAATTGCGAGATGCTGCAGAGGATGACATTGTGAATGTGGTAAAAGGTGATGAAACTGAAAGCCGTGTTGACAATGGAGAGACCATAGTAGATATGAGTGCTTCAGTGGAAGTAAGTAGTATTGAAGAAAATAAGGAAGATAGAGATGTTGAGAATCTAGATAAAGCTGTGGAAGCTGTGAACCATGGTGATAACTAG 2856 0.4419 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPADDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPIEQPNFPTTIQELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKMNDPETVRKRSKLMLPPPQISDHELDEIAKLGYASDQAGIEELGEGSSATRALLANYAQTPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKEIQTPNPVLTPSATPGGTPSLTPRSGMTPARDGFSFGMTPRGTPLRDELHINEDVDMNDSAKLELRRQADLRRSLRSSLSSIPQPKNEYQVVMQPVPEDAEESEEKIEEDMSDRVAREKAEEEARLQALLRKRSKVLQRGLPRPPSASLELIKNSSMRADEDKSSFVPPTSIEQADELIRKELLTLLEHDNAKYPLDENKEKKKGAKRSANMPAVPVIEDFQEFEMKDADQLIKEEAQYLRGAMGHESESLDKFVEAHTTCINDLMYFATRNGYGLSSVAGNMEKLAALQNEFENVRSKLDDGKEKVIRLEKKVMVLTQGYETRAKKSLWPQIEATFKLMDVAATELECFQALQKQEQLAASHRINNVWGEVQRQKELEKTLQKRYGDLVAELERVQNFMNQYRVKSQQEEIEAKNRELESTDDTVEVNVQGSENGSAVSVYPSHDETTDQQVDIVQDQATSTFKINDMGVESCEEQTKHDTDVKLRDAAEDDIVNVVKGDETESRVDNGETIVDMSASVEVSSIEENKEDRDVENLDKAVEAVNHGDN* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0601 951 MobiDBLite consensus disorder prediction 380 427 - -
Lan19g0601 951 CDD SANT_CDC5_II 55 106 - -
Lan19g0601 951 Pfam Myb-like DNA-binding domain 10 70 - -
Lan19g0601 951 Gene3D - 59 115 - -
Lan19g0601 951 Coils Coil 688 715 - -
Lan19g0601 951 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Lan19g0601 951 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Lan19g0601 951 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Lan19g0601 951 Coils Coil 167 187 - -
Lan19g0601 951 SMART sant 6 55 IPR001005 -
Lan19g0601 951 SMART sant 58 105 IPR001005 -
Lan19g0601 951 MobiDBLite consensus disorder prediction 113 150 - -
Lan19g0601 951 Gene3D - 5 58 - -
Lan19g0601 951 PANTHER - 1 895 - -
Lan19g0601 951 Coils Coil 807 827 - -
Lan19g0601 951 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Lan19g0601 951 Coils Coil 514 541 - -
Lan19g0601 951 SUPERFAMILY Homeodomain-like 33 107 IPR009057 -
Lan19g0601 951 CDD SANT 10 53 IPR001005 -
Lan19g0601 951 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 895 - -
Lan19g0601 951 MobiDBLite consensus disorder prediction 399 427 - -
Lan19g0601 951 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0601 Lan-Chr19 11285202 11291047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0601 1 815 MYB-Related Transcription Factor Family AT1G09770 74.756 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan19g0601 Myb_Cef 5.4e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0601 K12860 - gmx:100801352 1421.76