Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0598 ATGAGTTGCTTTCCATGTTTTTCATCTAATAAGGATAAGAATAGCGATAGCTTCAAGAAGGAGCAAGGAGGGCCTACACCACAAGAAAATATTATAACAAGAACACCAGTTGATATAAAGAAACCAAAAGAGGATACAAACCAAGTTGATCCTTCAAATATTCAAGCACAAAATTTCACATTTCGTGAACTAGCAACTGCAACAAAGAATTTCCGGCAAGAATGCCTTATGGGTGAAGGTGGCTTTGGAAGAGTCTACAAGGGTGCAATTCCTGCAACTGGACAGGTTGTAGCTGTGAAGCAACTCGACCGAAATGGAATGCAAGGAGGTAGCAAGGAATTTCTGGTTGAGGTTTTGATGTTAAGTCTCTTGCATCATGAGAATCTAGTCAAACTTGTTGGTTATTGTGCTGATGGAGATCAACGTGTTTTGGTTTATGAGTTCTTGCCCGGGGGCTCTCTCGAACACTGTCTTTTTGAGAGTAGACAAGATGAAGCACCATTAGATTGGTATAGCAGAATGAAAGTAGCATCTAGTGCTGCAAAAGGACTATGGTACTTGCACGACAAGGCTAATCCACCAGTTATATACAGGGACTTGAAATCTTCCAACATCTTACTTGATAATGAATTTAATGCAAAATTATCAGATTATGGATTAGCCAAACTTGCTGGTAAAGATAAGATGAATATTGTACCTACAAGAGTTATGGGTACCTATGGTTACAGTGCTCCCGAGTATGTAAGAACGGGTAACCTCACCTTGAAATCAGATGTCTATAGTTTTGGAGTTGTCTTGTTAGAGCTTATAACCGGAAGAAAAGCGGTTGACACCACAAGACCTAATGATGAGCAAAATCTAGTTTCATGGGCACAACCTATATTCAGGGACCCAAAAAGATATGGAGATATAGCAGATCCACTTCTGAATAAAAATTACCCAGACAAGGATCTTAATCAAGTTGTTGCAATAGCAGCAATGTGCTTACAAGAGGAATCAGCAGCAAGACCTTTGATGAGTGATGTTGTAACTGCTCTAAGCTTTCTTTCAACTTCTCCTCCAGAAAACAATGTTGTTAATGCTCCTGAAATCCCTCTTGATAGTAAAAATGAAAGCGAAGAAGAAGAAGAAGAATCTGTTAAGAGCAACAGCGATAGTTCTGATGAAGAAGATGGTTCTTATCACAACAAGGATAAAAGTAGTGATGATGAAACTGCTAAAGAAAAGGTTTCAGCTAGTGCAAAATACCAAGAAAGTGATGTGTCAGATGATTATTATCAGAATGAAGACCAACGTGATTATAGTCCTCAAGATACAAAGGATGAATATTACTCGAAACCAAGCCGCAAAAGCAGCACAAGATCAAAGAATGCAAACAATTCTTCTGGCCGCAGAATCAGCAGTTCTAGTAATTCAGATTCAGAAGATGGAATAAAATCATCACATGGTGTTGCTAATGGTAATATAAGCAAGAAGAGTAGCAAAAAAAATTCTCAGAGTCAAAACAAGAGTAAAAAGTCAAGCTTAAGCATAAAAAGTAGCAAAAAATCTGTGAGAGTTTTAAGCCACAAGAGAAGCAGTGGCAAGGGTTCAGAGAATGGAAATGATTCCAATAGCAGTGAAGAGTCACATGATGAAGGAGATGCGGTTTTCGACCGTAGCGAAAGTAGGCCTTCACAAGGGAACATGTCTTCTGGCCTTTTCAGCATTGATCAAAGTGTTCACTCAGATTATCAATACAGCATGGATAGAAGGTCCGAGGAAGGGAGCAATAGAATGCATATTTTGGACCATACAAGCAGCAGTGGATCAGATGATGAGGAATAA 1827 0.3897 MSCFPCFSSNKDKNSDSFKKEQGGPTPQENIITRTPVDIKKPKEDTNQVDPSNIQAQNFTFRELATATKNFRQECLMGEGGFGRVYKGAIPATGQVVAVKQLDRNGMQGGSKEFLVEVLMLSLLHHENLVKLVGYCADGDQRVLVYEFLPGGSLEHCLFESRQDEAPLDWYSRMKVASSAAKGLWYLHDKANPPVIYRDLKSSNILLDNEFNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRKAVDTTRPNDEQNLVSWAQPIFRDPKRYGDIADPLLNKNYPDKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTSPPENNVVNAPEIPLDSKNESEEEEEESVKSNSDSSDEEDGSYHNKDKSSDDETAKEKVSASAKYQESDVSDDYYQNEDQRDYSPQDTKDEYYSKPSRKSSTRSKNANNSSGRRISSSSNSDSEDGIKSSHGVANGNISKKSSKKNSQSQNKSKKSSLSIKSSKKSVRVLSHKRSSGKGSENGNDSNSSEESHDEGDAVFDRSESRPSQGNMSSGLFSIDQSVHSDYQYSMDRRSEEGSNRMHILDHTSSSGSDDEE* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0598 608 MobiDBLite consensus disorder prediction 450 508 - -
Lan19g0598 608 SMART serkin_6 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0598 608 SUPERFAMILY Protein kinase-like (PK-like) 47 350 IPR011009 -
Lan19g0598 608 MobiDBLite consensus disorder prediction 509 523 - -
Lan19g0598 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lan19g0598 608 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 589 - -
Lan19g0598 608 PANTHER OS07G0668900 PROTEIN 1 589 - -
Lan19g0598 608 Gene3D Phosphorylase Kinase; domain 1 39 148 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 385 414 - -
Lan19g0598 608 CDD STKc_IRAK 77 346 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 350 608 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 538 553 - -
Lan19g0598 608 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0598 608 MobiDBLite consensus disorder prediction 425 449 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 578 602 - -
Lan19g0598 608 Pfam Protein kinase domain 73 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0598 608 MobiDBLite consensus disorder prediction 555 577 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 369 384 - -
Lan19g0598 608 Gene3D Transferase(Phosphotransferase) domain 1 149 352 - -
Lan19g0598 608 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0598 Lan-Chr19 11247872 11251057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0598 1 353 Glycoside Hydrolase AT3G07070 63.158 1.10e-162 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan19g0598 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0598 - - gmx:100790911 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0461 4 6979994 6983548 Lan19g0598 19 11247872 11251057 LSH