Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0589 ATGGTCATAGGCATAGTTTTATTATCAATTGTCAAACTTTGGATCCTTGCACTTAACGTCTATGAAAGGTTTGTTCTAAGACGCCAAGCTGGCCGTGGAGCTTCCATTCACCATCTCACCCTCACCGTGACACACCCTCATGACCGAACTGCACCGCGAAACACAGGACTCGACCCTTTACTCATCAAGGCTCTTCCTATGTTCATCTTCAAGAAAAAAGGACCACACCAACAACAAAGACAAGATCATGATGATAATAATAACGATTGTGCTCTGTGCTTAAGTGATTTTGATAATGATGAAATGGTGAGGTTATTGCCTAATTGTAAGCACATTTTCCATGTTGGTTGCATAGATAAATGGTTGGCTTCACACACCACGTGTCCAATTTGA 393 0.4173 MVIGIVLLSIVKLWILALNVYERFVLRRQAGRGASIHHLTLTVTHPHDRTAPRNTGLDPLLIKALPMFIFKKKGPHQQQRQDHDDNNNDCALCLSDFDNDEMVRLLPNCKHIFHVGCIDKWLASHTTCPI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0589 130 ProSiteProfiles Zinc finger RING-type profile. 90 130 IPR001841 -
Lan19g0589 130 PANTHER RING FINGER DOMAIN-CONTAINING 5 130 - -
Lan19g0589 130 SUPERFAMILY RING/U-box 77 130 - -
Lan19g0589 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 130 IPR013083 -
Lan19g0589 130 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 5 130 - -
Lan19g0589 130 Pfam Ring finger domain 88 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0589 Lan-Chr19 11083474 11083866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0589 1 130 C3H Transcription Factor Family AT2G42360 37.692 8.39e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0589 K19038 - jre:108993654 140.969