Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0588 ATGGCACAATCACCTCCCAAGATCCCAAACATGTCAACAAGTTGGCAAGACTTTTCTTCTTACCAGAAGATTCCATCCTATGCAAACTTTGGAACCAACACCACAAACCATCAACATCATCAACTTAATACTACTACTAATAATAATAATAATAATAATAACAATAACAATGACATTAACCCTTCTTGGGTGGATGAGTTTCTTGACTTCTCCTCCGTGAGGCGCGGTGCACACCGCCGGGTGGTGAGTGATTCCATCACCCTCCTTGATGCACCACCAATGAGGCAAGAGAATAATGATAATAATGAGTTTGATAAGTTTGATGATGAACAATTTATGTCCATGTTCAATGACGAAATCTATGGTGTCGATGTGCCACCAACCTTGTCCTCTTCAAACCCTTCAAGCCCTTCGGATCAGAACTTCAACAATGATGAGGAGAAAACGAAGAATGAGAAAAAGGTAATGGAGGAGGAGAAGAAAAATTTGGGGGAAGAGGAAAAGCAACAACAAAATGAAATGAAAAATGAACCAGATGAGGTTGAAAGCGAATGCATACAAGAATTTTCAACACCTCCAAGTAACACCAATACCACTAAAACTACTTCTTCCAATGACAGAATTACTGACCCTAAGAGAGTCAAAAGAATCTTAGCAAATAGACAATCTGCGCAGAGATCTCGAGTGAGGAAGCTACAATACATATCAGAGCTTGAGCGAAGTGTAACTTCATTACAAGCTGAAGTTTCATTGCTATCTCCTCGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTTACTGTTGATAACAGTGCTCTTAAGCAAAGAATCGCCGCCCTAGGTCAAGACAAGATCTTCAAAGATGCTCATCAAGAAGCACTAAAGAGAGAGATAGAGAGACTAAGGCAAGTTTATCATCAACAAAATCTCAAGAACATGGAAAATGCTGCAGGGTCACCATCACCAAAGCCAAGATTTGATGCTCAAACTGAAAAGGAACAACTACAACTACTTAACGTTTGA 1023 0.3978 MAQSPPKIPNMSTSWQDFSSYQKIPSYANFGTNTTNHQHHQLNTTTNNNNNNNNNNNDINPSWVDEFLDFSSVRRGAHRRVVSDSITLLDAPPMRQENNDNNEFDKFDDEQFMSMFNDEIYGVDVPPTLSSSNPSSPSDQNFNNDEEKTKNEKKVMEEEKKNLGEEEKQQQNEMKNEPDEVESECIQEFSTPPSNTNTTKTTSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSLLSPRVAFLDHQRLLLTVDNSALKQRIAALGQDKIFKDAHQEALKREIERLRQVYHQQNLKNMENAAGSPSPKPRFDAQTEKEQLQLLNV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0588 340 Coils Coil 330 340 - -
Lan19g0588 340 MobiDBLite consensus disorder prediction 312 332 - -
Lan19g0588 340 SUPERFAMILY Leucine zipper domain 212 266 IPR046347 GO:0003700|GO:0006355
Lan19g0588 340 PANTHER BASIC LEUCINE ZIPPER 34 1 336 - -
Lan19g0588 340 Coils Coil 291 311 - -
Lan19g0588 340 Coils Coil 146 176 - -
Lan19g0588 340 SMART brlzneu 208 272 IPR004827 GO:0003700|GO:0006355
Lan19g0588 340 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 336 - -
Lan19g0588 340 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 262 IPR004827 GO:0003700|GO:0006355
Lan19g0588 340 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Lan19g0588 340 MobiDBLite consensus disorder prediction 143 182 - -
Lan19g0588 340 MobiDBLite consensus disorder prediction 123 211 - -
Lan19g0588 340 MobiDBLite consensus disorder prediction 126 142 - -
Lan19g0588 340 CDD bZIP_plant_RF2 213 263 IPR044759 GO:0003700|GO:0006355
Lan19g0588 340 MobiDBLite consensus disorder prediction 33 58 - -
Lan19g0588 340 MobiDBLite consensus disorder prediction 187 205 - -
Lan19g0588 340 Pfam Basic region leucine zipper 209 257 IPR004827 GO:0003700|GO:0006355
Lan19g0588 340 Gene3D - 211 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0588 Lan-Chr19 11041992 11045563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0588 1 289 bZIP Transcription Factor Family AT3G58120 53.795 2.04e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan19g0588 bZIP_2 3.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0588 - - cam:101507538 374.4