Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0582 ATGAAGCGATTTGTATACATCAATGATGGTGAATCATCACATGATTTATACTGTGATAATCGTGTTTCAAATAGAAAATATACTGTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAACCAGTACTTTTTGCTGATAGCTTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACTTGGGGTCCACTTATCTTTATTTTTGCAGTCTCCGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAGAAGGCAAATGAGAAGGAGGTCTGGGTTGTGAGGAAGGGCGTCAAGCAACATGTTGAAGCCCAAGATATTCTTGTGGGTAATTTAGTATGGCTTCGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGTACATCTGATTCTCAGGGAGTTTGCTATATAGAGACTTCTGCAATGGATGGTGAAATGGATCTGAAGACACGGGTCATACCTTCTGCTTGCATGGGAATCAATGTTGAACTTATGCATAAGATTAAGGGTGTAATCGAGTGTCCCAGTCCAGATAAAGACATTAGAAGATTTGATGCAAACATGCGGTTGTTCCCCCCATTTATTGATAATGACATATGCCCTTTAACCATTAAAAACACAGTTCTTCAGTCTTGTTACCTGCGGAACACTGAATGGGCATGTGGAGTGGCTGTGTATACAGGCAATGAAACCAAACTTGGCATGAGTAGAGGCATCGCAGAACCAAAGCTCACTGCTATGGATGCCATGATCGACAAGCTGACTGGTGCTATATTTGTATTTCAAATTGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGAAACAGAAGCGAAGAAACAATGGTATGTTCTTTACCCTGATGAAGGCCCTTGGTATGAACTATTGGTCATTCCTTTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTAGTGAAGAGCTTATATGCAAACTTTATTGATTGGGACCATCAGATGATTGACCTAGAGACTAATATTCCATCTCATGCAACAAATACAGCGATAAGCGAGGACCTAGGACAAGTTGAGTATATCTTGACTGACAAAACAGGCACCCTGACTGAGAATAAAATGATATTTAGAAGATGCTGTATCAATGGCATTTTCTATGGGAATGAGAATGGAGATGCATTGAAAGATGCAGAGCTTCTCAATGCTGTTTCCAGTGGTTTGCCGGACGTTGTACGATTTCTTACAGTTATGGCGATATGTAATACTGTCATACCTACACGAAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCAGGCTGCTGCTTGGCTGCATATGGTTTTCTTCAATAAGAATGGAAACATTCTTGAAGTCAAGTTCAACTCCAAGATACTTCAGTATGAAGTTTTGGAAACCTTAGAGTTCACATCTGATAGGAAAAGAATGTCAGTGGTGTTGAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCGAAAGGAGCAGATGAGGCTATTCTTCCATATGCTTGTGCTGGGAAGCAAACCCGAAACTTCGTTGAAGCTGTGGAGCAGTATGCTCACTTGGGACTACGTACGCTGTGTCTGGCTTGGCGTGAGTTGAACGAGGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCTAGCAGCACTTTGGTTGATAGAGAGTGGAGAGTAGCTGAGGTCTGTCAAAGAGTAGAGCATAACTTGGAAGTTCTTGGCGTGACAGCAATAGAGGATCGTTTACAGGATGGTGTCCCTGAAACTATAGAAACACTACGAAAAGCTGGAATAAATTTTTGGATGCTAACAGGAGACAAGCAGAATACCGCAATACAAATTGCCCTGTCATGTAATTTTATTTCTCCAGAACCGAAAGGGCAGCTTCTATCAATTGATGGAAAAACAGAGGATGAGGTTTATAGAAGTCTAGAGAGAGTGCTCCTTACAATGCGGGTAACTGTGTCAGAACCTAAGAATGTGGCTTTTGTTATTGATGGTTGGGCTCTTGAGATTGCACTTAACCACTACTGCAAAGCTTTTACTGAGCTGGCAATATTGTCAAGGACTGCTATATGTTGTCGAGTGACACCATCACAAAAAGCACAGCTTGTACAGATCCTAAAATCATGTGACTATAGAACATTGGCAATTGGTGATGGTGGGAACGATGTAAGGATGATACAACAGGCTGATATCGGTGTGGGCATTAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGTATAGGAAAGTTTAGATTTCTTAAAAGATTAATTCTGGTCCATGGCCGGTACTCTTACAACCGTACAGCATTTCTTTCTCAGTATTCATTCTACAAGTCCCTACTGATATGTTTCATCCAAATCTTGTGA 2481 0.4115 MKRFVYINDGESSHDLYCDNRVSNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVRKGVKQHVEAQDILVGNLVWLRENDEVPCDLVLIGTSDSQGVCYIETSAMDGEMDLKTRVIPSACMGINVELMHKIKGVIECPSPDKDIRRFDANMRLFPPFIDNDICPLTIKNTVLQSCYLRNTEWACGVAVYTGNETKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKETEAKKQWYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYANFIDWDHQMIDLETNIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDAELLNAVSSGLPDVVRFLTVMAICNTVIPTRSKTGDILYKAQSQDEDALVQAAAWLHMVFFNKNGNILEVKFNSKILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYACAGKQTRNFVEAVEQYAHLGLRTLCLAWRELNEDEYQEWSLMFKEASSTLVDREWRVAEVCQRVEHNLEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVYRSLERVLLTMRVTVSEPKNVAFVIDGWALEIALNHYCKAFTELAILSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0582 826 Gene3D - 602 790 IPR023214 -
Lan19g0582 826 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Lan19g0582 826 SFLD p-type atpase 362 801 IPR044492 -
Lan19g0582 826 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Lan19g0582 826 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 385 826 - -
Lan19g0582 826 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Lan19g0582 826 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 825 IPR023298 -
Lan19g0582 826 SUPERFAMILY HAD-like 374 805 IPR036412 -
Lan19g0582 826 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 427 825 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan19g0582 826 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Lan19g0582 826 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Lan19g0582 826 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Lan19g0582 826 Pfam Cation transport ATPase (P-type) 436 532 - -
Lan19g0582 826 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166
Lan19g0582 826 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 716 825 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan19g0582 826 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 599 661 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan19g0582 826 SFLD Haloacid Dehalogenase 362 801 - -
Lan19g0582 826 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Lan19g0582 826 Gene3D - 75 251 - -
Lan19g0582 826 Gene3D - 449 584 IPR023299 GO:0000166
Lan19g0582 826 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 825 IPR032630 -
Lan19g0582 826 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 385 826 - -
Lan19g0582 826 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 330 - -
Lan19g0582 826 Pfam E1-E2 ATPase 99 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0582 Lan-Chr19 10914889 10926186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0582 1 826 Primary Pumps ATPases AT5G44240 85.714 0.0 1500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0582 K01530 - gmx:100786505 1551.57