Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0579 ATGTCTTTCTCCGTTGTACTTTCCAATTCTCCTATCTTCTCTCTCTTCCCTAAAAACAAAAACTCAATCATTTCTTCTTCCTCAGAACCTCTTCCCCTTCTCCCTTCAACGACGTCGTCTTGCTCCTCACCCTCTTCACCTTCTTCACCATTCCATTTCGTCCTGCCAAAGACAGTAAATGGGTTTTCCGGTGCGGGTTCGGCTCCATCGTCGTCGGCGTTGAAGAGGAAGAGACCTGCAAAGCTTGATATACCCGTTGTTGCGTCTCTCACTGTTGGGGTGCAGGATGCGGCGGTGCCAATGGCGGAAGAGAGGGACGTGGTGGAGGTGGAGGGGCGTGGTTTTGCTGTTTACTGTAAGAGAGGAAGGAGGGAGCACATGGAAGACCGTTACTCTGCTGCCGTTGATTTTCATGGAGAACCAAAACAGGCTTTTTTCGGCATATATGATGGGCATGGAGGTACGAAAGCTTCAGAATTTGCTGCCCATAACTTAGAAAAGAATGTCATGGATGAAGTTGTAAGTAGAGATGAAAGTGATGTTGAGGAAGCAGTGAAATGTGGTTACCTCAACACAGATTCTGATTTCTTAAAAGAGAATCTACATGGTGGCTCTTGTTGTGTAACAACATTGATTAGGAATGGTAACCTTATTGTGTCCAATGTGGGTGACTGTCGCGCTGTCATTAGCAGAGGCGGTGTAGCGGAAGCACTCACATCTGATCATCGACCTTCAAGGGAAGATGAAAGAGAGAGAATTGAGACTCAAGGTGGCTATATTGATATATATCATGGTGTTTGGAGGATCGAGGGATCCTTGGCTGTTTCGAGAGGAATTGGTGATAGACACCTAAAACAATGGGTTATAGCAGAACCTGAGACCAAGGTGTTCAGAATTGAACCTCTACATGACTTACTAATCTTAGCTTCAGACGGATTATGGGAGAAGGTTAGTAATCAGGAAGCAGTAGATTTTTCTCGTCCGTTTTGTGTTGGGAGCAATAGACAGCAACCGTTGTTGGCTTGTAAAATGCTTGTAGACTTATCTGTATCACGAGGCTCGATCGATGATATAAGTGTCATGATAATCAAACTACAGAACTATATTTGA 1110 0.4477 MSFSVVLSNSPIFSLFPKNKNSIISSSSEPLPLLPSTTSSCSSPSSPSSPFHFVLPKTVNGFSGAGSAPSSSALKRKRPAKLDIPVVASLTVGVQDAAVPMAEERDVVEVEGRGFAVYCKRGRREHMEDRYSAAVDFHGEPKQAFFGIYDGHGGTKASEFAAHNLEKNVMDEVVSRDESDVEEAVKCGYLNTDSDFLKENLHGGSCCVTTLIRNGNLIVSNVGDCRAVISRGGVAEALTSDHRPSREDERERIETQGGYIDIYHGVWRIEGSLAVSRGIGDRHLKQWVIAEPETKVFRIEPLHDLLILASDGLWEKVSNQEAVDFSRPFCVGSNRQQPLLACKMLVDLSVSRGSIDDISVMIIKLQNYI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0579 369 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 59 368 - -
Lan19g0579 369 Gene3D - 107 369 IPR036457 -
Lan19g0579 369 CDD PP2Cc 113 365 IPR001932 -
Lan19g0579 369 SUPERFAMILY PP2C-like 114 367 IPR036457 -
Lan19g0579 369 ProSiteProfiles PPM-type phosphatase domain profile. 114 365 IPR001932 -
Lan19g0579 369 SMART PP2C_4 104 363 IPR001932 -
Lan19g0579 369 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Lan19g0579 369 PANTHER PROTEIN PHOSPHATASE 2C 59 368 IPR015655 GO:0004722|GO:0006470
Lan19g0579 369 Pfam Protein phosphatase 2C 116 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0579 Lan-Chr19 10673212 10676551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0579 1 369 PP2C-type Phosphatase Gene Family AT2G30020 59.045 1.40e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0579 K17506 - gmx:100779913 492.656