Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0538 ATGTTTAGTTATAAGGTTGGAAGTAGAAGAAGAGAGAAGAGGGGAGAAGAAGAAATTGTGAGAGACATGAATATGATGAGTTATAATAGTAATAATTCATCAGGTGGAGGAGGAGGGTATGGTCATGGTGGTGGTGAAGACATGAATGTGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGGGTGTGGGGTCCACCAGAATCAAAGGAAGAATGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCTCATTGTCTCTCTTCTCACCGCCCTCACCCTCTCCTCCAGGTGCGAAGATATGTTTACCATGATGTTATAAGATTGGATGATCTTGAAAAACTCATCAGTTGCTCCAATATTCAGCCCTATACAATAAACAGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAATCAAAGTCTTGCAAAGGTACTGCCAATGTTTGCTACACTTGTGACAGAATACTTCAGGAGCCCTTCCATTTTTGTTCCCTCTCATGCAAGGTTGATTACATGGTGTTCGAGGGTGAAAGCTTGTCCAGCATTTTACATCGATTCGATGAATCTGACTTTTCAATTTCGCAATTCGAGGGTTTAAGGGTTGATGGCTCTGAGGTTATTGATGAAGATACCCAATTTGCCCCGACCTCCTCTTGCTCCAACACTGAAGCCAACAGCAATTCCGTAATTTCATGTGAACCCAACAACATCATCAAGAAAAACAAGACCAATAGGTTCCTCGTCCTTGGAAGCAGAAGAAAGGGTGCTCCTCATAGGGCCCCTCTCTCCTAA 816 0.4326 MFSYKVGSRRREKRGEEEIVRDMNMMSYNSNNSSGGGGGYGHGGGEDMNVKPAWLERLMAETFFGGCGVHQNQRKNEKNIFCLHCCLSICPHCLSSHRPHPLLQVRRYVYHDVIRLDDLEKLISCSNIQPYTINSAKVIFLNQRPQSKSCKGTANVCYTCDRILQEPFHFCSLSCKVDYMVFEGESLSSILHRFDESDFSISQFEGLRVDGSEVIDEDTQFAPTSSCSNTEANSNSVISCEPNNIIKKNKTNRFLVLGSRRKGAPHRAPLS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0538 271 Pfam PLATZ transcription factor 106 177 IPR006734 -
Lan19g0538 271 PANTHER - 52 271 - -
Lan19g0538 271 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 52 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0538 Lan-Chr19 8661565 8667960 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lan19g0538 PLATZ 4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0538 - - lang:109334055 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0106 4 1596390 1603978 Lan19g0538 19 8661565 8667960 LSH