Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0536 ATGGGTTCAGGAGTAGAGAGTAATGAAGAAAGTGAGAATAAAGGTAGTATGTGGAGTTTGGATCAGAAGCTTGACCAGCCTATGGATGAAGAAGCAGGATGGCTCAGAAATATGCACAAAGAAAAAAAATTGTCTTCACTGTTACTTCTAAGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCACCATTGTATGTTTTCTATAATACATTTCCTAATGGAGTTAAAGATCAAGAAGATGTTATTGGTGCTCTTTCCTTGATCATTTACTCTCTTACTCTGGTCCCACTTCTCAAATATGTTTTCATTGTATTAAGAGCAAATGACAATGGCCAAGGTGGAACATTAGCTCTGTATTCTTTGCTCTGCCGCCACGCGAATATAAAAACCATTCCCAACCAACATCGAACCGATGAAGAGCTAACGACATATAGCCGGTCTACTATCCATGAAAAGTCATTTGCTGACAAAACCAAAAGGTGGTTAGAGGGAAAAGGATATATTAAAAATACCATTCTTATTCTTGTCCTAGTTGGTACCTGCATGATGATTGGAGATGGAATTCTTACCCCAGCTATTTCTGTTTTATCGGCTTCTGGCGGCATCAAGGTAAATCACCCCGATTTGAGTGGTGATGTTGTTTTGGTGGTTGCTGTTGTAATATTAGTTGGGTTATTCAGCATGCAGCATTATGGTGCAGATAGAGTTGGTTGGTTGTTTGCTCCAGTTGTACTACTTTGGTTTCTCCTAATTGGTGGTATAGGTATATTCAACCTCTGGAAACATGGGAGCAATGTTCTAAGAGCTTTTTCGCCTGTGTATATATTTCGGTATTTCAAAAGAGGAGGAAAAGAAAGTTGGACTTCCCTTGGTGGCATCTTGCTCTGCATAACAGGGACAGAGGCGCTATTTGCCGACCTAGGTCATTTTCCAGTCTTATCTGTACAGATTGCATTTACACTAGTTGTGTTTCCTTGCCTTCTTTTGGCCTATTCTGGTCAGGCTGCTTACTTGATGAATAACATGGATCATTCACCAGATGTTTTTTATCGCTCGATTCCAGTTTCTGCAGAGACTATATACTGGCCAGTATTCGCTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAGGCCACAATAACCGCGACCTTTTCAATTATTAAGCAAGCCCTTGCTCATGGTTGTTTCCCAAGAGTCAAAGTTGTACACACATCAAAGAAGTTCCTTGGCCAGATATATATTCCAGATATCAATTGGATCCTTATGGTTCTTTGCATTGCTGTAACTGCTGGGTTCAAAGAACAAAACCAGATTGGAAACGCATATGGAACTGCAGTTGTGATGGTCTTTCTGGTTACCACATTGCTTATGGTTTTGATCATGATATTAGTGTGGCGCTGTCATTGGATTCTAGTTCTCGTTTTCACCGGCTTATCATTGATTGTGGAGTGCACATACTTCACCGCGGTACTCTTCAAACTCGATCAAGGTGGATGGGCTCCCATTGTAATTGCTGCAGCTTTTCTAATTGTTATGTATGTTTGGCATTATGGTACGAAGAAACGCTATGAGTTCGAAATGCATAGTAAGATTTCAATGGCATGGATTCTTGGTCTCGGCCCAAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGATTAGTCTACACAGAGCTTGCAAGTGGCGTCCCCCACATCTTTTCTCATTTCATCACTAACCTACCAGCCATCCATTCTGTTGTTGTTTTTGTATGTGTGAAATATCTTCCTGTCTACACTGTCCCAGAAGAAGAGCGATTCCTTGTCAAGCGGATTGGACCGAAGAATTTCCACATGTTTCGATGTGTTGCACGATATGGCTATAAAGACCTGCATAAGAAAGATGATGATTTTGAGAAAAAACTCCTACACAACCTTTTCATATTTGTTCGACTCGAGGCTATGATGGAAGGCGGATCAGATTCAGATGAATACAGTTTATATGAACAACAGACAGAACAGTCGAAAGATGGTGTTTTGAACAATAGAAACATCGATTCACCTAATTTGGATTTAACATTGACATCACTAGATTCAATAGTATCAATCAGATCTCCATCACCTAGAAGCAGCAAGATTGAGGTTGAGGAACTTGAATATTTGAACAACTGCAAGGATGCTGGGGTGGTTCACATACTAGGAAACACAGTAGTGAGGGCAAGTAGAGACTCAACATTCTACAAGAAAATAGGTGTTGATTATATATATGCATTTCTTAGTAAGATATGTAGGGAGCATAGTGTGATCTTAAATGTACCTCATGAGAGTGTCTTAAATGTTGGTCAAGTATTCTATATATAG 2352 0.4022 MGSGVESNEESENKGSMWSLDQKLDQPMDEEAGWLRNMHKEKKLSSLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVKDQEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKTIPNQHRTDEELTTYSRSTIHEKSFADKTKRWLEGKGYIKNTILILVLVGTCMMIGDGILTPAISVLSASGGIKVNHPDLSGDVVLVVAVVILVGLFSMQHYGADRVGWLFAPVVLLWFLLIGGIGIFNLWKHGSNVLRAFSPVYIFRYFKRGGKESWTSLGGILLCITGTEALFADLGHFPVLSVQIAFTLVVFPCLLLAYSGQAAYLMNNMDHSPDVFYRSIPVSAETIYWPVFAVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMVLCIAVTAGFKEQNQIGNAYGTAVVMVFLVTTLLMVLIMILVWRCHWILVLVFTGLSLIVECTYFTAVLFKLDQGGWAPIVIAAAFLIVMYVWHYGTKKRYEFEMHSKISMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLLHNLFIFVRLEAMMEGGSDSDEYSLYEQQTEQSKDGVLNNRNIDSPNLDLTLTSLDSIVSIRSPSPRSSKIEVEELEYLNNCKDAGVVHILGNTVVRASRDSTFYKKIGVDYIYAFLSKICREHSVILNVPHESVLNVGQVFYI* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0536 783 PANTHER POTASSIUM TRANSPORTER 2 782 - -
Lan19g0536 783 TIGRFAM kup: potassium uptake protein 52 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan19g0536 783 Pfam K+ potassium transporter 54 627 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan19g0536 783 MobiDBLite consensus disorder prediction 1 20 - -
Lan19g0536 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0536 Lan-Chr19 8525828 8538458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0536 1 783 Inorganic Solute Cotransporters AT2G35060 75.539 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0536 K03549 - gmx:100794454 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0109 4 1656777 1663379 Lan19g0536 19 8525828 8538458 LSH