Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0510 ATGACAATTACTGAAAAAGCTCATGCTATTCTCTTTCATATACTCCTCATATCTTCACTTCCGATGAAAATCACAGCCTCAACAAGAACAGAAGCAGAAGCACTTGTGAAATGGAAAAACACTCTATCTCTTCCTCTTCTTCCTTCCATAGCTTCTTGGTCACTCAACAACTTTGCCAACTTTTGCAGCTGGGATGCCATTACTTGTGACAACACCAATAAAACTGTTTCAGAGATAAACTTATCTGGTTTCAATGTCAGTGGAACTCTCTTTGATTTTGGTTTTGATTCCTTCCCCAACCTCACTAGTCTCAACCTCAATGGAAATAGTCTTGAAGGGTCAATACCTTCTGCAATTGGCAGCCTTTCCAAGCTCACTTTTTTGGACTTGGGAAACAACTCTTTTGAGGACACAATACCTTCTGAGCTAGGCCAGTTGAAGGAGCTTGAATACCTTAGTTTTGATACCAACAATCTCAATGGTACCATTCCTTATCAAATCACAAATCTTCCTAAGGTAAGGTACTTAGATCTTGGATCAAATTACTTTGTATCTCCTTCTTCATGGTCTCAATATTCAGGCATGCATTCCTTAACTTACCTTGGTTTGGAATTCAATGACTTCGCTTCTGAAATCCCGAGTTTTATATCGGATTGCGAAAACTTGACATACCTTGACCTCTCTCAGAACTTTTTCAATGGAACAATATCAGAATCTATGTATACCAATCTAGGGAAGCTTGAATACCTCAACCTCACAAACTGTTTGCTACAAGGACAATTGTCATCAAACTTGTCCAAGCTTTCAAATCTCAAAGAACTTCATATAGGTAATAACAAGTTTACTGGTTCTATTCCAAAAGAAATAGGACTGATATCTAGGCTTCAAGTACTTGAACTGAATAGCATGTTAGTACAAGGAGAAATCCCTTCCTCCTTAGGCCAACTTAGGGAGCTGAGTTATCTTGATCTCAGTCATAATTTTTTGAACTCTACAATTCCTTTTGAACTTGGTTTTTGTACAAATCTAACTTACCTGAGTTTAGCAGCGAATGATTTGAGTGGTCACTTGCCTTTGTCACTATCTAACCTGTCCAAAATATCACTGTTGGGATTATCAGAAAATTCATTTTCTGGTGAAATTTCTGATTCACTGATCTCTAATTGGACTGAGTTGATCTCTCTTCAAGTCCAAAATAATAATTTTACAGGTCATATTCCTTCAGAGATTGGCCTATTGGCAAAAATCCAAATCCTCTTTTTGTATAATAATACATTCTCTGGTCATATTCCTGTAGAGATTGGAAACCTGAAAGAAACGATAGAGTTAGACCTTTCAGGAAACCAATTCTCTGGTCCAATTCCTCTAACCATTTGGAATCTTAGAAACCTTAATGTCTTGAATCTTTTCTTCAACAAGCTCTCAGGAACCATTCCAATGGATATTGGAAACTTAACCTCAATAACAAAATTCGATGTCAACAACAATAATCTGGATGGAGAGTTACCAGAGACCATTGCTCAACTAAATAGTTTAACATATTTTTCTGTGTTCAGTAATAACTTCTCGGGCAACATTCCCAGCGATTTCGGAAAGCATAGTCGAAATTTGTATAGCGTGTACTTTTCAAACAATGGCTTCACAGGAGAACTGCCTTCTGACTTGTGCAGTGGTAACATGCTAGCTTTTTTGGCAGTCAATAATAACAGCTTTTCCGGGCCATTGCCGAAGTCCTTAAGATATTGTTCAACACTAACTAGAGTTAGGCTTGATGAAAACCAATTCACTGGAAACATCACTGAGGTATTTGGGGTTTATCCAGATCTTAGTTTTATCTCTGTTAGCGGAAATCAGCTTACTGGTGAGCTCTCTCCTCAATGGGGTGAATGTGTCAACTTAACCAGGATGGATATGAACAGAAATCAACTTTCTGGAAAAATTCCACCCGAGTTGAGTAAGTTGAGTCAATTACAATATCTAAGCCTACATTCCAATGAATTTAGTGGCATTGTCCCACCCGAAATTGGGAACTTAAGCATGCTCTACATGTTCAACTTGAGCAGGAACCATTTCTCTGGAGAAATCCCTCAGAGTTTTGGGAGATTAGCTCAGCTTAGTGATCTTGATTTATCAGATAATGACTTCAGTGGAGGTATTCCCGAAGAGCTTAGTAATTGCGATCGCTTACTGAGCCTGAATTTAAGCCATAACAAACTCTCTGGGGAGATACCATATGAAGTTGGTAATCTGTTTGCACTTCAATACTTGTTAGACCTCAGTAGCAACTCTTTCACTGGGGAAATTCCACAAAACCTTGGCAAACTTGCATCATTGCAGATTCTCAATGTCTCACACAACAATCTCTCAGGGACGATTCCAAAATCCTTATCAAGTATGTTCAGCCTTCAGTATGTTGATTTTTCTTACAACAACTTGACCGGTTCAGTCCCAACTGATGGTATTTTCAAAACAGCAACAGTATCTTATGTTGGAAACTCCTTGTGTGGTATGGTTAAAGGATTAACTCCTTGCTCCTCAGTATCTTCCAAACACAAATCAGTAGGAGTTAACAAAAAGGTTCTTCTTGGTGTTATTATACCTGTTTGTGGGGTGCTATTTATTGCTGTTGTTGTAATCCTCATATTCCGACGGCAATCCAAACTCCGTGATGAAGAGTCCAAAAGCACTCAAAATAGTGATCAGTCTATTAGCATGGTATGGGGAAAAGATGGAAAATTCACATTTTCTGAACTTGTTAAGGCTACTGAAGACTTCGATGACAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTACAAAGCAGAATTACTTTCAGGTCAAGTAGTTGCTGTTAAAAGACTCAATATCTCAGACTCTGATGACATTCCTGCAGCGAACCGTCAGAGTTTCGAGAATGAGATACAATCACTTACCGGAGCCAGGCACCGCAATATAATAAAGCTCTATGGATTCTGTTTGAGGAGGAAACAAATGTTCTTGGCTTACCAATATATAGATAGAGGAAGTTTGAGGAATGTGCTGTATGCAGATGAAGGGAAGTTGGAGCTGAGTTGGGTTAGAAGAGTGAAAATTGTGCAGGGAATAGCACATGCAATTTCCTACCTGCATAGTGATTGCTCTCCACCAATTGTGCACAGAGATGTAACATTGAATAACATACTATTGGACTCAGATTTTGAACCCCGGCTCGCTGATTTCGGCACAGCAAAGCTTCTAAGCTCCAACAATTCAAGCTGGACTTCAGTGGCAGGCTCTTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTCACAGACAAGTGTGATGTTTATAGTTTTGGAGTGGTGGTATTAGAGATAATGATGGGAAAGCACCCGGGGGAACTCTTGATTACCAAGACTTCAATGGAAGATCCACAGATGCTTCTGAAGGATGTGCTGGACCAAAGGCTTCCACTTCCAACAGGCCAATTAGCTGAAGTAGTGGTGTTCATAATGACCATTGCTTTCGCGTGCACCCATGCAGCTCCTGAATCTAGACCCATGATGCGTGCTGTGGCGCAAGAACTATCTGCTACTACACAAGCTTGTCTTTATGAACCATTTGGCATGATAACCATGGACAAGCTTACAGGGTTTCAGAAGTAG 3657 0.3968 MTITEKAHAILFHILLISSLPMKITASTRTEAEALVKWKNTLSLPLLPSIASWSLNNFANFCSWDAITCDNTNKTVSEINLSGFNVSGTLFDFGFDSFPNLTSLNLNGNSLEGSIPSAIGSLSKLTFLDLGNNSFEDTIPSELGQLKELEYLSFDTNNLNGTIPYQITNLPKVRYLDLGSNYFVSPSSWSQYSGMHSLTYLGLEFNDFASEIPSFISDCENLTYLDLSQNFFNGTISESMYTNLGKLEYLNLTNCLLQGQLSSNLSKLSNLKELHIGNNKFTGSIPKEIGLISRLQVLELNSMLVQGEIPSSLGQLRELSYLDLSHNFLNSTIPFELGFCTNLTYLSLAANDLSGHLPLSLSNLSKISLLGLSENSFSGEISDSLISNWTELISLQVQNNNFTGHIPSEIGLLAKIQILFLYNNTFSGHIPVEIGNLKETIELDLSGNQFSGPIPLTIWNLRNLNVLNLFFNKLSGTIPMDIGNLTSITKFDVNNNNLDGELPETIAQLNSLTYFSVFSNNFSGNIPSDFGKHSRNLYSVYFSNNGFTGELPSDLCSGNMLAFLAVNNNSFSGPLPKSLRYCSTLTRVRLDENQFTGNITEVFGVYPDLSFISVSGNQLTGELSPQWGECVNLTRMDMNRNQLSGKIPPELSKLSQLQYLSLHSNEFSGIVPPEIGNLSMLYMFNLSRNHFSGEIPQSFGRLAQLSDLDLSDNDFSGGIPEELSNCDRLLSLNLSHNKLSGEIPYEVGNLFALQYLLDLSSNSFTGEIPQNLGKLASLQILNVSHNNLSGTIPKSLSSMFSLQYVDFSYNNLTGSVPTDGIFKTATVSYVGNSLCGMVKGLTPCSSVSSKHKSVGVNKKVLLGVIIPVCGVLFIAVVVILIFRRQSKLRDEESKSTQNSDQSISMVWGKDGKFTFSELVKATEDFDDKYCIGKGGFGSVYKAELLSGQVVAVKRLNISDSDDIPAANRQSFENEIQSLTGARHRNIIKLYGFCLRRKQMFLAYQYIDRGSLRNVLYADEGKLELSWVRRVKIVQGIAHAISYLHSDCSPPIVHRDVTLNNILLDSDFEPRLADFGTAKLLSSNNSSWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVVLEIMMGKHPGELLITKTSMEDPQMLLKDVLDQRLPLPTGQLAEVVVFIMTIAFACTHAAPESRPMMRAVAQELSATTQACLYEPFGMITMDKLTGFQK* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0510 1218 Gene3D Ribonuclease Inhibitor 482 847 IPR032675 -
Lan19g0510 1218 SUPERFAMILY L domain-like 339 528 - -
Lan19g0510 1218 CDD STKc_IRAK 931 1193 - -
Lan19g0510 1218 SUPERFAMILY RNI-like 78 403 - -
Lan19g0510 1218 SMART LRR_typ_2 775 799 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 195 219 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 702 726 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 654 678 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 268 292 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 461 485 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 98 121 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 122 146 IPR003591 -
Lan19g0510 1218 SMART LRR_typ_2 316 340 IPR003591 -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 293 418 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 1194 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 173 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 383 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 414 1194 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 29 173 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 383 - -
Lan19g0510 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 293 418 - -
Lan19g0510 1218 Gene3D Transferase(Phosphotransferase) domain 1 1006 1203 - -
Lan19g0510 1218 Pfam Leucine rich repeat 197 257 IPR001611 GO:0005515
Lan19g0510 1218 Gene3D Ribonuclease Inhibitor 189 481 IPR032675 -
Lan19g0510 1218 Pfam Protein kinase domain 928 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0510 1218 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan19g0510 1218 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Lan19g0510 1218 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1051 1063 IPR008266 GO:0004672|GO:0006468
Lan19g0510 1218 ProSitePatterns Protein kinases ATP-binding region signature. 931 953 IPR017441 GO:0005524
Lan19g0510 1218 Gene3D Phosphorylase Kinase; domain 1 885 1005 - -
Lan19g0510 1218 ProSiteProfiles Protein kinase domain profile. 925 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0510 1218 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Lan19g0510 1218 Pfam Leucine Rich Repeat 777 798 IPR001611 GO:0005515
Lan19g0510 1218 SUPERFAMILY RNI-like 535 814 - -
Lan19g0510 1218 SUPERFAMILY Protein kinase-like (PK-like) 901 1193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0510 Lan-Chr19 7627584 7631577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0510 1 648 Receptor kinase-like Gene Family AT4G08850 32.349 1.33e-82 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan19g0510 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0510 - - gmx:100809137 1704.49