Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0496 ATGGAATCTTTATCCAAAGTTCAACTCTTTTTCCTTACTTTTTGCACCACTCTCATTCTTACTACAATTCATGCACAAACACTTCAAACATACTTAGTTCAACTACACCCTCATGGCATAACTAGTCCTATGTTCACCTCTAAGATCAAATGGCATCTTTCATTCTTACAACAAACTATTTCATCCGATGATGACCCCGATTCTCGCCTTTTATACTCGTATCGTTCTGCGATGGATGGTTTCGCAGCTCGACTAACTGAGTCTGAACTCAAGTACTTGAAAAAGCTACCTGATGTTATCTCTATTAGGCCTGATAGGCAGGTCCAAATTCAAACCACTTATTCTTACAAGTTCCTTGGACTGAATCCTGCAAGAGAAAGTGACTGGTATCAATCTGGATTCGGCCGTGGAACTATAATTGGAGTACTTGATACTGGAGTATGGCCGGAGAGTCCTAGTTTCAATGATCATGGAATGCCTCCAATTCCAAAGAAATGGAAGGGTATATGCCAATCAGGGCAGGCCTTTAACTCTTCAAATTGTAACCGAAAACTCATCGGTGCACGGTACTTTACCAAAGGCCATCTTGCAGTATCACCTTCAAAAATTCCAGAATATCTCTCACCAAGAGACTCATCAGGACATGGCACACACACTTCATCCACTGCTGGTGGCACCCCGGTGCCGAGGGCCAGTGTGCTTGGTTATGCAGCAGGTGTGGCAAGAGGAATGGCTCCTAGTGCACACATTGCAGTGTACAAAGTGTGCTGGTTCAATGGCTGCTATAACTCGGATATCATGGCTGCAATGGACATGGCAATTAGAGATGGTGTGGACATTCTATCTTTATCACTAGGTGGCTTCCCTGTGCCTCTATTTGATGATAGCATTGCCATTGGAAGCTTTAGAGCAATGGAGCATGGGATTTCGGTTATTTGTGCAGCCGGAAACAATGGACCAACAGCAATGTCTGTAGCAAATGAAGCACCTTGGATTAACACTGTTGGTGCAAGCACACTGGATAGAAAATTCCCAGCCATAGTTCACATGGGAAATGGAAAAATTCTCTATGGAGAATCCATGTATCCAGTTAACAAGCTAAGGAGCATTGGCAAGGAACTTGAGCTTGTTTATCTGAACGACGGCGATACGGAAAGTCAATTTTGCCTCAGAGGGTCCCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTGGTGTGTGATAGAGGTGTAAATGGAAGAGCAGAGAAGGGTCAAGTTGTGAAGGATGCAGGTGCTGCTGCTATGATTTTGGCAAATACTGAGATAAACTTGGAAGAGGATTCGGTTGATGTTCATTTCTTGCCAGCAACTTTGGTAGGTTTTGATGAATCAGTCACCTTGAAAGCTTACATAAACTCTACAAAGAGGCCTCTTGCTAGAATTGAATTTGGAGGAACTGTGATAGGAAAGTCTAGAGCTCCAGAAGTTGCAATATTCTCATCTAGAGGACCAAGTTTCACAAATCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGTGTCAACATCATTGCTGCATGGCCTCAGAACCTTGGTCCTACAGGCCTTCCAGAGGACACTAGAAGAGTGAACTTCTCAGTCATGTCTGGTACCTCAATGTCATGTCCTCATGTAAGCGGAATTGCTGCTCTTATTCATTCAGCTCATCCGAGATGGACTCCGGCAGCAATCAAATCAGCAATCATGACAACAGCTGAGGTAACTGACCACACAGGAAGACCAATACTAGATGAAGATAAACCAGCTACAGCTTTTGCCTTAGGAGCAGGACATGTGAATCCGAAAAGAGCATTAAATCCAGGTCTTATATATGACATTAGGCCTAATGATTACATCAACCACCTTTGCAGCATTGGTTATAAAGGGTCAGAAATATTCAGTATCACTCACAGAAATGTCAGTTGCCATGAAATCATGAAGATGAATAGAGGCTTCAGCCTTAACTACCCTTCTATGTCAGTAATGTTTAAGCATGGAATGAGAAGAAAAATGTTCAGAAGGAAAGTAACAAATGTTGGAAGTCCTAACTCCATCTACTCAGTGGAGGTTATGGAACCTGAAGGAGTAAAAGTTATAGTGAAACCAAAGAGGCTAGTATTTAAACAAATGAACCAAAGCTTGAGTTACAAGGTATGGTTCATATCAAGAAAGGAGGTTAAGAAAGGTGCTGATATAATGACCTTTGCAGAAGGGAGTTTGACATGGATACACTCTCAAAATGGTTCTTGCAGGGTTAGAAGTCCAATATCAGTGACTTGGAAATCTAAGTAG 2310 0.4238 MESLSKVQLFFLTFCTTLILTTIHAQTLQTYLVQLHPHGITSPMFTSKIKWHLSFLQQTISSDDDPDSRLLYSYRSAMDGFAARLTESELKYLKKLPDVISIRPDRQVQIQTTYSYKFLGLNPARESDWYQSGFGRGTIIGVLDTGVWPESPSFNDHGMPPIPKKWKGICQSGQAFNSSNCNRKLIGARYFTKGHLAVSPSKIPEYLSPRDSSGHGTHTSSTAGGTPVPRASVLGYAAGVARGMAPSAHIAVYKVCWFNGCYNSDIMAAMDMAIRDGVDILSLSLGGFPVPLFDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWINTVGASTLDRKFPAIVHMGNGKILYGESMYPVNKLRSIGKELELVYLNDGDTESQFCLRGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKDAGAAAMILANTEINLEEDSVDVHFLPATLVGFDESVTLKAYINSTKRPLARIEFGGTVIGKSRAPEVAIFSSRGPSFTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRVNFSVMSGTSMSCPHVSGIAALIHSAHPRWTPAAIKSAIMTTAEVTDHTGRPILDEDKPATAFALGAGHVNPKRALNPGLIYDIRPNDYINHLCSIGYKGSEIFSITHRNVSCHEIMKMNRGFSLNYPSMSVMFKHGMRRKMFRRKVTNVGSPNSIYSVEVMEPEGVKVIVKPKRLVFKQMNQSLSYKVWFISRKEVKKGADIMTFAEGSLTWIHSQNGSCRVRSPISVTWKSK* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0496 769 SUPERFAMILY PA domain 371 438 IPR046450 -
Lan19g0496 769 SUPERFAMILY Subtilisin-like 111 615 IPR036852 GO:0004252|GO:0006508
Lan19g0496 769 ProSiteProfiles Serine proteases, subtilase domain profile. 113 611 - -
Lan19g0496 769 Pfam Fibronectin type-III domain 660 764 IPR041469 -
Lan19g0496 769 Gene3D - 628 766 - -
Lan19g0496 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Lan19g0496 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 766 IPR045051 -
Lan19g0496 769 MobiDBLite consensus disorder prediction 207 226 - -
Lan19g0496 769 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Lan19g0496 769 Gene3D - 341 481 - -
Lan19g0496 769 Gene3D Peptidase S8/S53 domain 137 624 IPR036852 GO:0004252|GO:0006508
Lan19g0496 769 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Lan19g0496 769 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Lan19g0496 769 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Lan19g0496 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Lan19g0496 769 Pfam Subtilase family 135 589 IPR000209 GO:0006508|GO:0008236
Lan19g0496 769 MobiDBLite consensus disorder prediction 212 226 - -
Lan19g0496 769 CDD PA_subtilisin_like 348 474 - -
Lan19g0496 769 CDD Peptidases_S8_3 108 578 IPR034197 -
Lan19g0496 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 25 766 - -
Lan19g0496 769 Pfam PA domain 375 456 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0496 Lan-Chr19 7348790 7352022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0496 9 768 Subtilisin-like Serine Gene Family AT1G04110 65.455 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0496 - - lang:109333602 1536.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1233 5 26168160 26171397 Lan19g0496 19 7348790 7352022 LSH
Lan19g0496 19 7348790 7352022 Lan11g1365 11 20846709 20849481 PCT
Lan19g0496 19 7348790 7352022 Lan20g1013 20 10872271 10874762 PCT
Lan11g1365 11 20846709 20849481 Lan19g0496 19 7348790 7352022 PCT
Lan20g1013 20 10872271 10874762 Lan19g0496 19 7348790 7352022 PCT