Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0490 ATGGGGAGGAGGATTCTGAATGAAGCTCTCAGTGCTATGGTCAATGCTGAAAGGAGAGGCAAATCTACGGTTGAGATTAAACCTTCCTCCACTGTTATCTCTTCTTTTCTCCAAATCATGAAACACCGAGGCTATATCAAAGGCTTCCAAGTCAGTGATCCACATAGAGTTGGGAGGATAACAGTTGAATTACAAGGTAGGATCAACGCTTGCAAAGCCATTACATACCGGCAAGACATCAAAGCAAAGGATATTGAAGCCTACAAATCATGTGCTCTCCCAACACGCCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATTAAAAGAAATGTAGGTGGCCAGGTTCTTGGTTACTTTCACTGA 390 0.4333 MGRRILNEALSAMVNAERRGKSTVEIKPSSTVISSFLQIMKHRGYIKGFQVSDPHRVGRITVELQGRINACKAITYRQDIKAKDIEAYKSCALPTRQWGYVVITTPDGVLDHEEAIKRNVGGQVLGYFH* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0490 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lan19g0490 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-2 1 129 - -
Lan19g0490 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lan19g0490 129 Gene3D - 69 129 - -
Lan19g0490 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lan19g0490 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lan19g0490 129 Gene3D - 2 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0490 Lan-Chr19 7219912 7221621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0490 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.519 2.53e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0490 K02957 - zju:107419531 221.09