Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0484 ATGCAGACTTCACTTTTCTTCTTCTTCGTTGCCCTTTTCAACTTTCTTTTCTCTTCACCAGTGAAGTCGTTTTCTCTGAGTGTATCATTCATTTCATCAGAACAAGCTAAAACATGGCTAGTTAAACCTTCTTCTAGACCATCTCCCGCACCAGCACCAGCTCCATCTTATCAAGGTCCTAGCTTGACTCCAAGACCAAGACATTATCGCCATCGCGGTCACCATCATAGCATGACACCTAATACAGTGGCTCCACCCCCTTCAAAAGACCAGGCTTGTGTCTGTACGGAACCACTCACATCAACTCCCTATGGTTCTCCTTGTGGATGTGTATTTCCCATGAGAGTCAGACTTTCACTGGATATAGCTCTCTATGCTGTTTTTCCAGTAATGAATGAGTTAGAGATTGAAGTTGCATTAGGCACATATTTAGAGCAAAGTCAGGTAAAGATAATGGGTGCTAGTGCTGACAGTCAAAACCAGGGAAGAACTAATGTTGATATTTACTTGGTTCCACTGGGAGAGAAATTTGATGATACCACTGCAGCTCTGACATCTGAGAGGTTTTGGCACAAGAAAGTTCCTCTGAATAGGAGCATTTTTGGTGATTATACCATTGTGTACCTTACATATCAAGGATTTCCACCATCACCACCATATGGAAATTATGATGGGAGTGATCCCAGTGAAAGTCCTGGTGGTCTGCCACTCAGTGCCAACTTTGATACCAAAAACCAGAAAATGAATCTTAGAACCATAATCATCATTGCCTTATCGTCCTTTGTACTCTTGCTGGTTTTGGTTGGAGCATGTTTCGTAATTTTGAAATGGAGGAAGGTCGGGAAACCATCAAGTGCTGTTGGTCCTACATTCACTTCATCTATAAACAAGAGATCTGGCCTGGGGTCTATGTTATCTAGCAGTATTACAAGCTCGACATCAGTGTCCCTTATGTCCACAATGCCTACATCCATTCTCTCTGCTAAAACATTTTCGCTTTCTGAGCTTGAGAAAGCAACAGATAGGTTTAATTCAAAGAGGGTATTAGGAGAAGGAGGTTTTGGACGTGTGTACAGTGGGACACTGGAAGATGGGACTGAAGTTGCAGTTAAGATGCTAACAAGGGATAATAATCAGAATGGTGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTGAAACTGATTGGTATATGCATTGATGGTCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCACAATGGAAGTGTTGAGTCCCATCTGCATGGCGTTGACAAGAAAGATGAGCCACTAGATTGGGAAGCACGGATGAAAATTGCCCTTGGTGCTGCAAGAGGACTGGCCTATCTTCACGAGGATTCTAATCCTCGCGTGATTCACCGTGACTTTAAGGCTAGCAATGTGTTATTAGAAATTGACTTTACCCCCAAGGTTTCTGATTTTGGCTTGGCTAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACACGGGTGATGGGAACTTTTGGGTATGTTGCTCCAGAATATGCAATGACAGGCCATTTACTTGTTAAAAGCGACGTATATAGCTTTGGTGTTGTGCTGCTAGAACTTCTCACAGGCAGAAAACCAGTGGACATGTCTCAACCCGAGGGACAGGAGAATCTCGTCACTTGGGCACGACCACTGTTGACGAGTAGAGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGTCCGGAACTTACAACTTTGATGACATGGCGAAGTTCGCTTCCATCGCTTCAATGTGCGTTCACCCAGAGGTCACTCACAGACCCTTTATGGGTGAAGTCGTGCAGGCTATTAAGTTGATATACAATGACACAGATCATGACACTTATGGAGATTGTTTTAGCCTGAAGGACTCATCTGCTCATGAGTCTGATTATCGAGGCGGCAATCTCGCCCCTTCTGATAGCAGTTGGTGGAATGATGGAGGGTTAACTCCAAGATTAACTTATGGCGAAACATCTTTCATCACAATGGAATATAGTTCTGGTCCACTTCAAATGGAAAACAGACAGTTTTCAACTTCAAGCTTGGTTGAAGATATATCTGTACCAATTCGGCATGGGAATATGTCAGGTCCCTTAAGAACAAACAGAAGCAAACTATCCCTATATAGATTTACAGGAAGCAGGAGTGAACATGGGGAATTCTCGGCTAGGCGTGAATGGTGA 2223 0.4336 MQTSLFFFFVALFNFLFSSPVKSFSLSVSFISSEQAKTWLVKPSSRPSPAPAPAPSYQGPSLTPRPRHYRHRGHHHSMTPNTVAPPPSKDQACVCTEPLTSTPYGSPCGCVFPMRVRLSLDIALYAVFPVMNELEIEVALGTYLEQSQVKIMGASADSQNQGRTNVDIYLVPLGEKFDDTTAALTSERFWHKKVPLNRSIFGDYTIVYLTYQGFPPSPPYGNYDGSDPSESPGGLPLSANFDTKNQKMNLRTIIIIALSSFVLLLVLVGACFVILKWRKVGKPSSAVGPTFTSSINKRSGLGSMLSSSITSSTSVSLMSTMPTSILSAKTFSLSELEKATDRFNSKRVLGEGGFGRVYSGTLEDGTEVAVKMLTRDNNQNGDREFIAEVEMLSRLHHRNLVKLIGICIDGRRRCLVYELVHNGSVESHLHGVDKKDEPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEIDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPEGQENLVTWARPLLTSREGLEQLVDPSLSGTYNFDDMAKFASIASMCVHPEVTHRPFMGEVVQAIKLIYNDTDHDTYGDCFSLKDSSAHESDYRGGNLAPSDSSWWNDGGLTPRLTYGETSFITMEYSSGPLQMENRQFSTSSLVEDISVPIRHGNMSGPLRTNRSKLSLYRFTGSRSEHGEFSARREW* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0484 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lan19g0484 740 Gene3D Transferase(Phosphotransferase) domain 1 420 635 - -
Lan19g0484 740 Pfam Protein tyrosine and serine/threonine kinase 345 614 IPR001245 GO:0004672|GO:0006468
Lan19g0484 740 Gene3D Phosphorylase Kinase; domain 1 315 419 - -
Lan19g0484 740 MobiDBLite consensus disorder prediction 46 60 - -
Lan19g0484 740 MobiDBLite consensus disorder prediction 42 87 - -
Lan19g0484 740 SUPERFAMILY Protein kinase-like (PK-like) 327 615 IPR011009 -
Lan19g0484 740 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 7 740 - -
Lan19g0484 740 PANTHER OS01G0750732 PROTEIN 7 740 - -
Lan19g0484 740 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lan19g0484 740 ProSiteProfiles Protein kinase domain profile. 343 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0484 740 CDD STKc_IRAK 349 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0484 Lan-Chr19 7124574 7130391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0484 92 732 Receptor kinase-like Gene Family AT5G56890 53.383 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan19g0484 PK_Tyr_Ser-Thr 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0484 - - gmx:100815554 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0474 9 7057864 7063443 Lan19g0484 19 7124574 7130391 LSH