Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0483 ATGGCTGCTGCTCCTAATCTTATAGTTGGGTCCCATATTTGGGTGGAGGACTCTGATGTAGCTTGGATAGATGGTAAGGTCTTGGAGGTTAATAATGACGAAATCAAAGTCCTTTGTACTTCCGGGAAGACGGTTGTTTTTAAAGCTTCCAATGTTTATCATAAAGATACTGAACTCCCACCAAGTGGAGTGGATGATATGACAAGGCTTGCATACCTGCACGAACCCGGAGTCCTAGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTATACTGGGAATATATTAATCGCTGTCAACCCTTTTATGAATCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGATCAACTTTTGGTGAGTTAAGTCCACATCCATTTGCTGTTGCAGATGCAGCATATAGGCTTATGATAAATGACGGTATCAGCCAGTCAGTATTGGTTAGTGGTGAAAGCGGGGCTGGTAAAACAGAATGTACTAAGTTACTTATGCGGTATCTTGCTTACATGGGAGGGAGAGCTGCTACTGCGGATGAAGGTAGAACTGTTGAGCAAAAAGTTCTGGAGTCTAACCCTGTTCTCGAAGCCTTTGGAAATGCAAAGACTCTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATGAGAGGGGAAGAATTTCTGGAGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGTCAGGTGTCAGATCCAGAAAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCGGAAGAAGTGAAGAAGTACAAATTAGGAAACCCAAGAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTGCAAGGGGTTGATGAATCTAAAGAATATAGAGCCACAAGGAGCGCAATGGATGTTGTTGGAATAAGTTCCGAGGAGCAGGATGCAATATTTCGGGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCGAAAGGAAAGGAGACGGACTCATCTGTGCCCAAAGATGAGAAGTCTCGGTTCCATCTAGAGACTGCTGCTGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACACGCGATGAAGCAATTACAAAATGGCTGGATCCAGAGAGTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTGTACACACGGTTATTTGACTGGTTGGTTGATAACATCAATAATTCCATTGGTCAAGATCCTGAGTCAAAGTCCTTAATTGGAGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATTAATTTGGCCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAGTTTGTCGACAATCAAGATGTTCTTGATCTCATTGACAAGAAACCCGGTGGCATTATTGCTCTACTTGACGAAGCTTGTATGTTTCCTAGATCAACACCTGAAACTTTTGCACAAAATCTGTATCAGACCTTCAAAAACCACAAAAGGTTCAGCAAGCCAAAATTTTCACGTAGTGGCTTCACAATTGACCATTATGCTGGTGATGTCACTTATCAAACTGATTTATTCCTCGACAAGAACAAAGATTACATTGTTGCAGAACACCAAGAACTTCTCTATGCTTCCAAATGCTCCTTTGTATCAAGTTTGTTTCGCCCTTCACCGAAGGCGTCATCCAAACAGTCAAAGTTCTCTTCAATAGGTTCACAATTTAAGCAACAATTGCAAACTTTACTTGAAACTCTCAATGCCACTGAGCCACACTACATTCGTTGTGTAAAACCAAATAACCTTCTTAAGCCAGCTATTTTTGAGAACAAAAATGTTTTACTGCAACTGCGTTGTGGGGGAGTTATGGAGGCTATACGGATAAGCTGTGCTGGGTATCCCACCAGAAAAACATTTCACGAATTTCGGGATCGATTTGGCCTTCTTTCACCTGAAGTGTTGAATGGAAGTATTGATGCGGTTGCTGCTTGCAAGAGGATTCTAGAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTTTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCATAGGAGTGAGATCTTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTCCGTTCCTATTTGGCTCAGCGAAGTTTTATCTCAGTTCGTTTGTCCGCTATTCAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGTAACGCGGAAGGAGACTTCTAGTTTGATGATTCAGGCGTATCTTCGCATGCATATTGTTAGGAAGGCATACAAAGAGTTGTATACCTCTGCTTCCTCTATTCAGACTAGTATGCGAGGAATGGCTGCTCGCTGTGAGCTACGCTTTAGAAGGCAGACTAGAGCAGCAATTGTCATTCAGAGTCACTGGCGAAAATACCTGGCGCAAATTCATTTTACAAGATTAAGGAAGGCAGCAATTATCATGCAATGTGCATGGAGAGGAAAATTTGCACGACATGAATTGCGGAAGCTGAAGATGGCTGCAAGAGAGACAGGTGTTCTTCAAGCTGCCAAAACTAAGCTTGAAAAGCAAGTTGAAGACCTTATGTTGAGGTTGCAGCTAGAAAAACGTTTGAGGGTTGACATGGAAGAAGCAAGAAAACTAGAAAACAAAAGATTACAGTCTGCATTGGAAGAAACTAAGATACTTCTTGAGAAGGAGCGGGAGGCTACGAAAAAAGCAGAAGAGAGAGTGACTGTCATACAGGAGATTCCAGTTGTTGATCATGCTTTGTTGGAGAAGCTCAGTAGCGAAAATGAAAAACTCAAGAACATGTTGAGTTCAATGGAAAAGAAAATTGATGAAACTGAAAAAAAGTATGAAGAGGCAAACAAAATTGGCGAAGAAAGGTTGAAACAAGCTTTGGAAGCCGAGTCGAAAGTAATCCAATTGAAAACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGACACTGAATCTGCATACCATATCCTTCAGAAACAATCACAGTTAAACTCATCTGTGAAAACAATAGCAGAGCACCTCCCAACTCCTGTAGCCGAGAAGTTGGAAAATGGTCACCATGTGAAAGAAGAGCAGAAATTTATTGAAACACATGTTGCACCTGTGGAACAGTTAGGTAGAGAATCTGATACTAAATTGAGGAGATCTATCATTGAACAACAACATGAGAATGTTGATTCACTTATCAACTGTGTAAGGAAAAATATTGGCTTCAATCATGGAAAGCCTATTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTCGATCGCCTTATCCAGATGATTGGTTCAGAAATTGAGGATCAAGATGGAAATGATCTTATGGCTTATTGGCTGTCAAATACATCTGCGTTATTGTTTCTACTTGAAGAAAGCCTTATATCTGATGGAGCAACGGCTGCAACGACAGCTAGAAAACCACCAAGTCCTACATCCCTTTTCGGAAGAATGGCGGGTTTTCTTTCACCCCCTTCTGCTAATATTGCTGCACATGCATTGGAGGTTGTGCAAAAGGTAGAGGCTAAATACCCTGCAGTGCTTTTCAAGCAGCAGCTCACAGCCTATTTGGAGAAAATGTATGGCATCATTCGAGACAACTTGAAAAAGGAGTTAACATCCATACTTGCATCATGTATCCAGGCACCAAGAACTTCAAAGGGAGTGTCAGGATCTGTTCGAAGCTTAGGGAAAGATTCTGCCATTGTTCTCTGGCAGAGTATTATTGAATCCCTCAATTCTCTCCTCTGTACACTGAAAGAGAACTTTGTGCCTCCAGTTCTTATACAAAAGATCTTCAGTCAAACATTCTCATATATTAATCTGCAACTCTTCAATAGTCTTCTTCTGCGTCGCGATTGTTGCACATTCAGCAACGGGGAATATGTGAAAGCTGGATTGGCTGAATTGGAGATGTGGTGCTGTCGAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAACTGAAGCACATAAGACAGGCTGTTGGGTTCTTGGTTATTCATCAGAAATATAGGATTTCCTATGATGAGATCATTAAGGATTTATGCCCTATACTGAGTGTCCAGCAGCTGTATAGAATATGCTCATTTTACTGGGATGATAACTACAATACTCTGAGCGTAACTCCAGATGTCCTTTCAAGAATGAAGATGCTTATGGCTGTGGACTCCAATAGCGCTCAGAGCGATTCTTTCTTGATTGATGACAGTTCCAGCATCATTCCCTTCTCAGTGGATGACCTTTGTAAATCATTGCAAGTGGAGGATTTCTCAGACTTGGAACCAGCAGATGAGCTTCTTGAGAATCCAGCCTTCCAATTTTTAAATGAGTAG 4518 0.4075 MAAAPNLIVGSHIWVEDSDVAWIDGKVLEVNNDEIKVLCTSGKTVVFKASNVYHKDTELPPSGVDDMTRLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFMNLPHLYDSHMMAQYKGSTFGELSPHPFAVADAAYRLMINDGISQSVLVSGESGAGKTECTKLLMRYLAYMGGRAATADEGRTVEQKVLESNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDERGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGNPRTFHYLNQSNCYELQGVDESKEYRATRSAMDVVGISSEEQDAIFRVVAAILHLGNIEFAKGKETDSSVPKDEKSRFHLETAAELFMCDAKALEDSLCKRVIVTRDEAITKWLDPESAALSRDALAKIVYTRLFDWLVDNINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLANEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDVLDLIDKKPGGIIALLDEACMFPRSTPETFAQNLYQTFKNHKRFSKPKFSRSGFTIDHYAGDVTYQTDLFLDKNKDYIVAEHQELLYASKCSFVSSLFRPSPKASSKQSKFSSIGSQFKQQLQTLLETLNATEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFHEFRDRFGLLSPEVLNGSIDAVAACKRILENVGLEGYQIGKTKVFLRAGQMAELDTHRSEILGKSASIIQRKVRSYLAQRSFISVRLSAIQIQAACRGQLARQVYEVTRKETSSLMIQAYLRMHIVRKAYKELYTSASSIQTSMRGMAARCELRFRRQTRAAIVIQSHWRKYLAQIHFTRLRKAAIIMQCAWRGKFARHELRKLKMAARETGVLQAAKTKLEKQVEDLMLRLQLEKRLRVDMEEARKLENKRLQSALEETKILLEKEREATKKAEERVTVIQEIPVVDHALLEKLSSENEKLKNMLSSMEKKIDETEKKYEEANKIGEERLKQALEAESKVIQLKTAMQRLEEKFSDTESAYHILQKQSQLNSSVKTIAEHLPTPVAEKLENGHHVKEEQKFIETHVAPVEQLGRESDTKLRRSIIEQQHENVDSLINCVRKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIEDQDGNDLMAYWLSNTSALLFLLEESLISDGATAATTARKPPSPTSLFGRMAGFLSPPSANIAAHALEVVQKVEAKYPAVLFKQQLTAYLEKMYGIIRDNLKKELTSILASCIQAPRTSKGVSGSVRSLGKDSAIVLWQSIIESLNSLLCTLKENFVPPVLIQKIFSQTFSYINLQLFNSLLLRRDCCTFSNGEYVKAGLAELEMWCCRAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIIKDLCPILSVQQLYRICSFYWDDNYNTLSVTPDVLSRMKMLMAVDSNSAQSDSFLIDDSSSIIPFSVDDLCKSLQVEDFSDLEPADELLENPAFQFLNE* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0483 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 786 IPR027417 -
Lan19g0483 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 885 IPR027417 -
Lan19g0483 1505 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Lan19g0483 1505 ProSiteProfiles IQ motif profile. 808 837 IPR000048 GO:0005515
Lan19g0483 1505 Coils Coil 1009 1043 - -
Lan19g0483 1505 Gene3D - 668 735 - -
Lan19g0483 1505 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 ProSiteProfiles Dilute domain profile. 1151 1450 IPR002710 -
Lan19g0483 1505 SMART iq_5 832 854 IPR000048 GO:0005515
Lan19g0483 1505 SMART iq_5 855 877 IPR000048 GO:0005515
Lan19g0483 1505 SMART iq_5 784 806 IPR000048 GO:0005515
Lan19g0483 1505 SMART iq_5 736 758 IPR000048 GO:0005515
Lan19g0483 1505 SMART iq_5 807 829 IPR000048 GO:0005515
Lan19g0483 1505 SMART iq_5 759 781 IPR000048 GO:0005515
Lan19g0483 1505 SMART MYSc_2a 56 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 Coils Coil 893 952 - -
Lan19g0483 1505 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Lan19g0483 1505 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Lan19g0483 1505 Pfam IQ calmodulin-binding motif 790 806 IPR000048 GO:0005515
Lan19g0483 1505 Pfam IQ calmodulin-binding motif 857 877 IPR000048 GO:0005515
Lan19g0483 1505 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Lan19g0483 1505 ProSiteProfiles IQ motif profile. 833 859 IPR000048 GO:0005515
Lan19g0483 1505 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 ProSiteProfiles IQ motif profile. 761 789 IPR000048 GO:0005515
Lan19g0483 1505 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0483 1505 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Lan19g0483 1505 CDD MyosinXI_CBD 1102 1474 IPR037975 GO:0007015
Lan19g0483 1505 Gene3D - 835 884 - -
Lan19g0483 1505 Gene3D - 737 786 - -
Lan19g0483 1505 Gene3D - 787 834 - -
Lan19g0483 1505 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Lan19g0483 1505 Pfam DIL domain 1326 1429 IPR002710 -
Lan19g0483 1505 PANTHER MYOSIN-14 7 1503 - -
Lan19g0483 1505 Gene3D - 254 312 - -
Lan19g0483 1505 Gene3D - 441 625 - -
Lan19g0483 1505 Gene3D Kinesin motor domain 65 664 IPR036961 -
Lan19g0483 1505 SMART DIL_2 1325 1432 IPR002710 -
Lan19g0483 1505 Coils Coil 967 1001 - -
Lan19g0483 1505 CDD MYSc_Myo11 76 722 IPR036018 -
Lan19g0483 1505 PANTHER MYOSIN 7 1503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0483 Lan-Chr19 7097019 7118798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0483 1 1504 Myosins gene family AT5G43900 71.429 0.0 2209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0483 K10357 - gmx:100795648 2491.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0473 9 7041847 7052420 Lan19g0483 19 7097019 7118798 LSH
Lan19g0483 19 7097019 7118798 Lan11g1368 11 20937994 20967953 PCT
Lan19g0483 19 7097019 7118798 Lan20g0716 20 5879728 5895337 PCT
Lan11g1368 11 20937994 20967953 Lan19g0483 19 7097019 7118798 PCT
Lan20g0716 20 5879728 5895337 Lan19g0483 19 7097019 7118798 PCT