Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0481 ATGAATGGGGCGCAAAGAAGAAAAATTCACAATGTTGAGAAACCTTTCCCAGGGTGTTTGGGAAGAATGGTTAACATCTTTGATTTTACTCCTGCTGCGACCGGGAACAGGCTACTCACAGATAAGCCGCATCGTGACGCTTCTTCACTTTCACGAAGTCAGTCAGATATTGCGAGGGTCATCAATTCCACGTTTGGTGATCATCTAGAGGATAAGATGATTGTTTCTGACTCGATGAAAGCAACCCCAAAGAAAAAAATAAGTGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAATTGTTTCCAAGCACAATCCACCAAATGTAGTTGCTAAACTAATGGGTCTTGATGCTCTCCCACAGGGAGAGTCTAATTTAGCTGAGGAGAGAAGCCATAGAGGAGATTATTCTCAACGCATGTGTGGTCATTCAGGGACACCATTCAAGCATCGGAAGCTAGAAGATAGGTATATGGACAAGGAAATGCTTCATGAAGTTCATCCCAGCACAGAACAGATTGCTTACAAAGATGTTTATGATATTTGGCTGCAATCTCAGAGAAAAAGCAATGTAAGAAACAAGACACCGGAAAGAGAAAAGTGGACTGAAGATGTTAATGCGGAAAAAATGGCTCTCGTTTACCAGAAATTCATGGAAGCAAAACATCTGTCTACAGATGAGAGACTGCGCCAGTCCAAGGAGTTTGATGAGGCCTTGGAAGTTTTAAGCTCCAATAATGATCTGTTAATCAGGTTACTGGATTCTCCAAATCTATATGAACTTAACCCTACTCCACTAGTTGAAACAAAGCGTATTACCGTTCTTAAACCTTCGAAGATGGTTGACAATGAGAAACCATGTGGAAAGGGGAAGAATGACAAGCAGATTAAGAAACCAGAAAATGGTTGTCAAGCAGCTGCATGGGAGAATAATAGCCCTGGATACTCTCCAGCCTGTCAGAAAGTTGATAAGTTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTACCTCTGGGAAGACACAAGAGATTAAGGCTGTGGCTTCTCCAACAATTTCATCACCTCGGAATATGCAAAGTGGAAATTTCTATCAGGGACCTGAAGACAGTGGTGCACTAGAACCAAGAGAAGCTGCACAAGAAATTACAGAGCAAATGCATGAAAGCGTGAAGAGCCATCAAAGAGATGAAACTTTTTATTCTTCAGTATTTTCCAACGGCTATACTGGTGACGAGAGTTCATTCGAAAAATCAGATAACGATGGGAATTTGAGTGATTTGGAAGTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCACTGTGACAGTCCTTATTCTTCATCGCCATTCAGTCGTGCATCCTGTTCTCCCGAGTCATCAGTATGCAGGGAGGCCAAAAAACGGCTTTCTGAAAGATGGGCCATAATGGCATCAAATATGGGTCCTCAAGAACAAAGGCATTTGTGGAGAAGTTCTACCTTGGGTGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGTAATATCTGAAGTTGAAGGTAGTAGTAAGGAACAAGAACCAAGTGAATCGGTTTCTTGTAATTTCAGTGAAGAAATATGTATGGATGGTTCACCTAAAAATCTTCCCAGGTCAAAATCTGTCCCTGTATCTTCTACTGCATATGAAACCAGGCTAGGCAGTGAAGTTTGTTATCATGATGCCAGCAAAATACATGATTCCAAGGAACTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTGACGAGTTTCTTATTCTCAAGGAATAAGAAATCAACCAAGGAAAAGTCTCCTCTGTCTCAAGCTAAAGACGAATCGCAATCTAATGTCTCTGAAACATCAGTATCTCCAGTAAATTCACCTGGAGTCCTTAGGGATGCTATGTCTCAAGGCTTCAACAGTGGTGCCCTTCGAGAGTATCCTCTTCCAGATTTACATGAATCATCAGGCAAAAATTTATCAGACTCTGTCTCTAAAGGAAAAGGCGTAATATCTCTTGAGCCAGGGTTGACTGTGTCAAAGACTATGGTGCCACAGCTTTCAAGTGAAAACCAAGATCAGCCGAGTCCAATTTCAGTTTTAGAACCTCCATTTGAAGATGATAATGCAGCTCATGAGTCCTTGCAATTTATGAGGGGTGGTCAGCTAGGATCGCCAGCGTCTCTGAAATCTAATTTAATTGACAAGTCACCACCAATAGAATCAATAGCTAGGACCCTATCATGGAATGATTCTTGTGCAGAGGTATCAAGTCCATATCCATTAAATTCCTCCTTGGTTTCCCTAGACACCAAGGTAGAGGAACAAGACTTGCTTGTCTTGGTTGAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGTACAGTCCAATTCGTTTTACTCAAAATGGCATTCCCTTGAAAGTGCACTGGACCCATCATTGAGGGACACATATGCCAATCTGAATGACAAGGAGCCTCAGCCTCTCCATGAAGCCAAGAGAAGGCAGAGAAGATCAAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCAGTAATGGAAATTACTGGTTTTGGATCAGATAAATTCTTAATGAACAGTTTGTGTAGTAGGGGCCACAGCAGGGTTCCTGTGCCAGAAGGTGAAACTCCCCTATTGGTGGACCTCATTGTGGCCCAAATAAAGGAGTTAATATCTGGTGGGTTTAGGTCTGTTTGGGTGGATTGTGGGGACAGTAACAGCCTGGTGCTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGTGTATGGAACTGGAGATGGATATTTTGGTGAAGGAAATAGAAAGGAAGTTGCTAGAAGAACTTGTGGAGGATGCTGTGGTTGATTTGACAGGCAGGGCCTGA 2931 0.4207 MNGAQRRKIHNVEKPFPGCLGRMVNIFDFTPAATGNRLLTDKPHRDASSLSRSQSDIARVINSTFGDHLEDKMIVSDSMKATPKKKISGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLDALPQGESNLAEERSHRGDYSQRMCGHSGTPFKHRKLEDRYMDKEMLHEVHPSTEQIAYKDVYDIWLQSQRKSNVRNKTPEREKWTEDVNAEKMALVYQKFMEAKHLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSPNLYELNPTPLVETKRITVLKPSKMVDNEKPCGKGKNDKQIKKPENGCQAAAWENNSPGYSPACQKVDKFPVQPTRIVVLKPTSGKTQEIKAVASPTISSPRNMQSGNFYQGPEDSGALEPREAAQEITEQMHESVKSHQRDETFYSSVFSNGYTGDESSFEKSDNDGNLSDLEVMSPSPRHSWDYINHCDSPYSSSPFSRASCSPESSVCREAKKRLSERWAIMASNMGPQEQRHLWRSSTLGEMLALSDIKKSVISEVEGSSKEQEPSESVSCNFSEEICMDGSPKNLPRSKSVPVSSTAYETRLGSEVCYHDASKIHDSKELTKSKSMKSSFKGKVTSFLFSRNKKSTKEKSPLSQAKDESQSNVSETSVSPVNSPGVLRDAMSQGFNSGALREYPLPDLHESSGKNLSDSVSKGKGVISLEPGLTVSKTMVPQLSSENQDQPSPISVLEPPFEDDNAAHESLQFMRGGQLGSPASLKSNLIDKSPPIESIARTLSWNDSCAEVSSPYPLNSSLVSLDTKVEEQDLLVLVEKLLSAAGLDDQVQSNSFYSKWHSLESALDPSLRDTYANLNDKEPQPLHEAKRRQRRSNQKLVFDCVNVAVMEITGFGSDKFLMNSLCSRGHSRVPVPEGETPLLVDLIVAQIKELISGGFRSVWVDCGDSNSLVLESVVRKEVVGKGWVECMELEMDILVKEIERKLLEELVEDAVVDLTGRA* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0481 976 MobiDBLite consensus disorder prediction 607 644 - -
Lan19g0481 976 MobiDBLite consensus disorder prediction 656 676 - -
Lan19g0481 976 MobiDBLite consensus disorder prediction 355 371 - -
Lan19g0481 976 Pfam DUF761-associated sequence motif 110 125 IPR032795 -
Lan19g0481 976 MobiDBLite consensus disorder prediction 415 435 - -
Lan19g0481 976 MobiDBLite consensus disorder prediction 385 400 - -
Lan19g0481 976 Pfam Protein of unknown function (DUF3741) 219 261 IPR022212 -
Lan19g0481 976 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 975 - -
Lan19g0481 976 MobiDBLite consensus disorder prediction 619 637 - -
Lan19g0481 976 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 975 - -
Lan19g0481 976 Pfam Domain of unknown function (DUF4378) 792 967 IPR025486 -
Lan19g0481 976 MobiDBLite consensus disorder prediction 355 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0481 Lan-Chr19 6999126 7004589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0481 1 973 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 42.772 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0481 - - gmx:100816611 1453.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0471 9 7013362 7018836 Lan19g0481 19 6999126 7004589 LSH
Lan19g0481 19 6999126 7004589 Lan11g1370 11 21018686 21023070 PCT
Lan11g1370 11 21018686 21023070 Lan19g0481 19 6999126 7004589 PCT