Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0475 ATGAGTCAATTCCTGAAGCCTGAGAATGCCCTCAAAAGGGCAGAAGAATTGATCAACGTTGGACAGAAGCAAGATGCTTTGCAGACTCTTCATGACCTCATCACTTCAAAACGATACCGAGCATGGCAGAAGACACTCGAAAGGATCATGTTCAAGTACGTCGAGCTTTGTGTTGATATGCGTAAAGGGCGGTACGCCAAGGATGGGCTGATTCAGTATCGTATCATATGTCAGCAAGTTAATGTTGGTTCTCTAGAGGAGGTGATCAAGCATTACATGCACCTCTCGACTGAGAAAGCTGAAAAGGCCCGGAGCCAGGCACAAGAGTTGGAAGACGCTCTCGATGTTGATGATCTAGAGGCAGATAAAAAGCCTGAGGACCTGATGCTCAGCTACGTCAGCGGTGAGAAAGGGAAAGAGAGATCTGACCGGGAGCTTGTGACTCCTTGGTTTAAGTTTCTTTGGGAAACATACAGAACAGTGCTTGAAATTTTGCGAAACAACTCCAAACTGGAAGCCCTATATGCTATGACAGCTCATCGAGCTTTCCAGTTTTGTAAGCAATATAAGCGAACGACTGAGTTCCGCAGACTTTGTGAAATCATAAGAAACCACTTGGCCAATCTGAATAAATACCGTGACCAACGTGACCGACCTGATCTTTCTGCTCCTGAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCAACTGAACTTGAACTCTGGCAGGAAGCTTTTCGATCAGTTGAAGATATACATGGCCTAATGTGCTTGGTCAAGAAAACGCCCAAGTCATCCTTGATGGTCGTTTACTATGCTAAGCTGACCGAAATATTTTGGATATCATCAAGTCATTTATATCATGCATATGCATGGTTCAGGCTCTTTTTATTACAAAGAAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCGGTTCCTCCTCATGATCACACTCAGGGTGCATCTCATTTTGAACTGGAGCATGAGAAGGAGAGAAATTTCAGGATGGCTAACCTGATAGGCTTTAATCTTGAAACCAAACCTGAAAGCAGAGAAGTGCTTTCCAGGTCATCGCTTCTTGCTGAACTGGCTTCCAAGGGTGTGATGTCTTGTGTAACTCAGGAAGTGAAGGACATTTACCATCTTGTGGAACATGAATTTCTTCCGTCAGATCTTGCATTAAAAGTGCAGCCCTTGTTAACCAAAATCTCGAAGTTAGGGGGTAAGCTTTCCACTGCTTCATCTGTCCCAGAGGTGCAACTGTCTCAGTATGTCCCGGCATTGGAGAAACTGTCTACCTTGAGGTTGCTACAGCAGGTGGCTAATGTGTATCAGACAATGAAGATCGAGACCTTATCTGGGATGATCCCCTTCTTTGATTTTTCAGTAGTGGAAAAAATTTCCGTGGATGCTGTTAAGCAGAAGTTTGTATCAATGAAAGTTGATCACATGAAAAATGTTGTAGTTTTCAGCAAAGTGAGTCTTGAGTCTGATGGTTTAAGGGATCACCTGGCCAGTTTTGCTGAACAATTGAACAAGGCAAGACAAATGATTTATCCTCCAGAGAGGAAGCCATCAAAACTTGGAGCTTTACTTCCCTCTTTGACAGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAGCGGCAACTTCTTGAATTGGAACGTGAGGAGGAGTCAAAGAAGTTAAGACTGCAGAAAATAACTGAAGAAGCTGAACAAAGAAGACTTGCAGCTGAATATGAGCAGAGGAAGAACCAGAGGATCCTCAGGGAAATAGAGGAAAGACAAAAGGAGGAAACTCAAGCTTTGCTTCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGGAAAAAGCCAATCATAGAGGGGGATAAAATGTCCAAGCAAACTCTGATGGAGTTAGCTTTGACTGAACAACTCCGAGAAAGACAAGAAATGGAGAAGAAACTGCAAAAATTAGCTAAAACCATGGATTATTTGGAAAGAGCTAAAAGAGAAGAGGCTGCTCCCCTGATTGAAGCTGCGTATCAACAGCGCCTAGTGGAAGAGAGGGTTCTTCATGAGCATTTGCAACAGCAAGAGGTTGAACTGAGCCAACAGCGCCATGAGGGAGATCTCAGGGAGAAGGACAGGCTTGTTCGAATGATAGGCAATAAAGAGATATATCAAGAGAGAGTTGTTAGTCATCGCGAAGCAGAATTTAACAGATTGAGGCGGGAAAGGGAGGAGCGGATCTCTAGGATTTTACTGACCAGGAGACAGGAGAGGGAAAAATTGAGGAAGCTAAAGTTTTATCTGAAACTAGAAGAAGAGAGGCAGGAAAAATTGCATGCAGAGGAAGAAGCACGGAAGCAAGAAGAGGCTGAAAGGCGAAAGAAGGAAGAGGCTGAACGCCTGGCAAAATTAGCCGAGATCGCCGAAAAGCAGAGGCAGAGAGAACTGGAACTCGAAGAAAAGGAAAGAAAGAGAAGAGAAGAGTTGTTGGGCCGAACCACTGAAGCAGCTTTGAAGCCTTCTGAACCTCTTTCCCGTCCACCTGAGCCTCTATCTGCTGCTCCTGCTGCAGCTGCAGCTGCTGCAGCACCAGCCGCTGGGAAATATGTTCCCAAGTTCCGACGTGAGAGGACTGAAGGTGCAGGTGCTGCTGCTGCGCCTCCTCCAGAAACTGATCGCTGGACTAAGCCAGACGGTGAAAGGTGGCGCAGTGGTGATGATCGGAGACCCTCAGCATTTGGTTCAGGTTCAAGGGCATCATCCACATGGTCCAGGAACCGTTGA 2871 0.45 MSQFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRYAKDGLIQYRIICQQVNVGSLEEVIKHYMHLSTEKAEKARSQAQELEDALDVDDLEADKKPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFRLFLLQRSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHFELEHEKERNFRMANLIGFNLETKPESREVLSRSSLLAELASKGVMSCVTQEVKDIYHLVEHEFLPSDLALKVQPLLTKISKLGGKLSTASSVPEVQLSQYVPALEKLSTLRLLQQVANVYQTMKIETLSGMIPFFDFSVVEKISVDAVKQKFVSMKVDHMKNVVVFSKVSLESDGLRDHLASFAEQLNKARQMIYPPERKPSKLGALLPSLTEVVAKEHKRLLARKSIIEKRKEEQERQLLELEREEESKKLRLQKITEEAEQRRLAAEYEQRKNQRILREIEERQKEETQALLQEAEKRIKKKGKKPIIEGDKMSKQTLMELALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERVLHEHLQQQEVELSQQRHEGDLREKDRLVRMIGNKEIYQERVVSHREAEFNRLRREREERISRILLTRRQEREKLRKLKFYLKLEEERQEKLHAEEEARKQEEAERRKKEEAERLAKLAEIAEKQRQRELELEEKERKRREELLGRTTEAALKPSEPLSRPPEPLSAAPAAAAAAAAPAAGKYVPKFRRERTEGAGAAAAPPPETDRWTKPDGERWRSGDDRRPSAFGSGSRASSTWSRNR* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0475 956 Coils Coil 621 649 - -
Lan19g0475 956 Gene3D UVR domain 217 267 - -
Lan19g0475 956 SMART PINT_4 441 532 IPR000717 -
Lan19g0475 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 909 - -
Lan19g0475 956 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lan19g0475 956 Gene3D - 358 496 - -
Lan19g0475 956 Gene3D - 268 357 - -
Lan19g0475 956 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 909 IPR027512 GO:0005852
Lan19g0475 956 Coils Coil 796 856 - -
Lan19g0475 956 MobiDBLite consensus disorder prediction 806 827 - -
Lan19g0475 956 MobiDBLite consensus disorder prediction 840 862 - -
Lan19g0475 956 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 937 IPR027512 GO:0005852
Lan19g0475 956 Coils Coil 667 697 - -
Lan19g0475 956 MobiDBLite consensus disorder prediction 922 937 - -
Lan19g0475 956 Coils Coil 561 602 - -
Lan19g0475 956 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lan19g0475 956 MobiDBLite consensus disorder prediction 840 956 - -
Lan19g0475 956 Coils Coil 93 120 - -
Lan19g0475 956 Pfam PCI domain 373 510 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0475 Lan-Chr19 6885929 6892516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0475 1 945 Eukaryotic Initiation Factors Gene Family AT4G11420 71.414 0.0 1306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0457 9 6884681 6891163 Lan19g0475 19 6885929 6892516 LSH