Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0474 ATGGCGTTTATCTCTGGACTTCAGCGTCTTCTTCGAAACTCACCACTTCTTCCTTCTTCACACTTCACTTCTTTCATTCGTCTCAGTTCAACTCTCACTTCCCCCAAACTTTTTGTTAGCGGTCTTTCTAGACTGACAACAGATGAAAAACTACAGGAAACATTTTCTTCTTTCGGGCAGTTGATCGAAGCTAAGGTGATAACTGATAGAGCTTCTGGAAGATCAAAGGGATTTGCTTTCGTAACTTATGCAACAATAGAAGAAGCAGAAAAGGCAAGAGAAGGAATGAATGCTAAATTTTTGGATGGATGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAACCAAGACCACCTCCTCAGCAATCACAGTCTCAACCTTCTGAAACAGGTTTCACAGTTAACAAGACCATTGGGTGGACTGGTTGA 429 0.4149 MAFISGLQRLLRNSPLLPSSHFTSFIRLSSTLTSPKLFVSGLSRLTTDEKLQETFSSFGQLIEAKVITDRASGRSKGFAFVTYATIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQQSQSQPSETGFTVNKTIGWTG* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0474 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 103 IPR000504 GO:0003723
Lan19g0474 142 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 142 - -
Lan19g0474 142 SMART rrm1_1 36 109 IPR000504 GO:0003723
Lan19g0474 142 Gene3D - 28 135 IPR012677 -
Lan19g0474 142 SUPERFAMILY RNA-binding domain, RBD 33 127 IPR035979 GO:0003676
Lan19g0474 142 PANTHER NUCLEOLAR PROTEIN 8 1 142 - -
Lan19g0474 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Lan19g0474 142 MobiDBLite consensus disorder prediction 111 142 - -
Lan19g0474 142 MobiDBLite consensus disorder prediction 124 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0474 Lan-Chr19 6882295 6885098 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0474 20 117 Eukaryotic Initiation Factors Gene Family AT4G34110 36.735 2.96e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0474 - - lang:109334292 243.047