Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0450 ATGCACAGAGCTTCAGATGAAAGGCCGCAGAGGATCAAATACGGATCCACATCCATGGATCCACTAGGATTACTTGAAATTATGGACATTTACTTTCCTCATCAATTGTTCACAATCGAAGAAACTTGGCTCAATCTCTCTTCTGCTCTATTTTCATTCTTTTCTTCTCCGAACGGCGAAAACCTCATTTCTCAGGTAAAAAGTGATTATGGAAACTTTGTCTTGTCACTTGACTTTCAGCAGCTCAAAAGAATATGTCATATTGAGGAACTTTATGAAATGTTAGAGGCGAAACCTAAAATTGCACTCTTATGCATGAGTGTTGCAGTTCACAAGGTTTTGCTTTCTAAAATGGAGAATGACAAGCTGGAGCTTGGTGCGAAAGTAGATATCCGTATTCATAACTGTCCCGAAACCATGATTGCTCTGAAGAACTTAAAAGCAGCTTACATCGACAAGCTTGTTTCGGTGCGTGGTACTGCTGTAAAAGTCAGCACTGTCAGGCCCCTTGTGGTAGCAATGAGTTTTGAATGTATTAAGTGTAAACAACCAATTATGCGAATATTTCCTGATGGAAAATTTTCACCGCCATCAACTTGCAATTTGAATGGTTGCAAGAGCAGAATCTTTAATCCATTACGACCTACTGCTCAAATAATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGATCATGAAGAAGGACGGATGCCTCGAACAGTGGAATGTGAGCTTACTCAAGATCTTGTTGATGCATGCATACCTGGAGATGTGGTGACTGTCACTGGAATTATACGAGGAATTAACACTTACATGGATATTGGTGGAGGGAGATCAAAGAACAGAAACCAAGGATTTTACTATTTGTATCTCGAAGCTGTGTCCGTGAAAAATTCGAAGTCGCAGTCCACATCTGAGGACTTGCAAGACTCAAATCCCACAGCTAGACCGACTGAGCTGTTTGATTTGTTTACATTTTCTTCAAAGGATCTAGAATTCGTGGTGAAGTTTGCAGAAGAGCATGGTTCAGATTTATTTCGGCAAATCCTTCAATCTATATGCCCATCCATCTATGGACATGAGCTTGTCAAAGCTGGGATAACTCTGTCATTATTTGGCGGTGTGCGAAAACATTCCATGGATCAGAATAAGGTTCCTGTGAGGGGAGACATTCATGTCATAATTGTTGGTGATCCTGGTTTGGGTAAGAGCCAGTTGCTACAAGCAGCAGCAGCTGTTTCTCCGCGCGGTATCTATGTCTGTGGTAATGCCACAACCAAAGCTGGCCTCACTGTAGCTGTTGTGAAGGATCCCATGACAAGTGACTATGCTTTTGAGGCTGGTGCTATGGTTCTGGCTGACAGTGGATTGTGCTGTATTGACGAGTTTGATAAAATGTCATCAGAACATCAGGCTTTGCTGGAGGCAATGGAGCAACAGTGCGTGTCTATTGCAAAGGCAGGATTAGTAGCAAGTTTATCGTCCCGGACTTCTGTTTTGGCAGCTGCAAATCCTGTTGGTGGTCATTATAACCGGGCAAAAACTGTAAATGAAAATTTGAAAATGAGTGCTGCTCTCCTGTCCCGTTTTGATTTAATTTTCATACTGTTGGACAAACCTGATGAACTTCTGGACAAGCGACTCTCGGAGCACATTATGTCACTTCATGCTGGCTATGGACAACATTCACCAGCATTGAAAAAACAACGTGGAAATCCACCTTCAGATTCAAGAACTACTTTATCACAGAATACTGAGGGTGTAGATTTGCATGTTAGATCTGGTTCTTTAGTTTCGAGATTAAGACTTGACCCTCGAAGGGATAGAGATTTTGTTCCATTACCCGGTCAACTTCTTCGCAAATACATTGCTTATGCAAGGAGTTATGTCTTTCCTAGGATGTCCAAGCCAGCAGCAGAAATCCTACAGAAGTTTTACCTTAAACTGAGAGATCATAATACTTCGGCAGATGGTACTCCAATAACAGCAAGGCAATTGGAAAGTCTCGTAAGGCTGGCTGAAGCTCGAGCAAGGCTGGATTTGAGAGTAGATATAACGGCCCAGGATGCAATGGATGTTGTCGAAATCATGAAGGAATCTCTGTATGACAAATATGTTGATGAGCATGGTGTTGTGGATTTCGGTCGAAGTGGGGGGATGAGTCAACAGAAAGAGGCAAAACGCTTCTTAAACGCCCTCAATAAACAATCGGAACTTGAACAAAAAGATTGCTTTTTAGTATCTGAAATATACAGTTTGGCAGATAGGATTGGGTTGAAAGTTTCTGATATTGACACTTTCATAGATAATTTAAACAGCGCTGGTTATCTACTCAAAAAAGGTTCAAAGACATATCAGGTATTATCTTCTTCTTATTCACGAAGCCAATCATTCAGGTCAAGGAGCTAA 2421 0.4106 MHRASDERPQRIKYGSTSMDPLGLLEIMDIYFPHQLFTIEETWLNLSSALFSFFSSPNGENLISQVKSDYGNFVLSLDFQQLKRICHIEELYEMLEAKPKIALLCMSVAVHKVLLSKMENDKLELGAKVDIRIHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVAMSFECIKCKQPIMRIFPDGKFSPPSTCNLNGCKSRIFNPLRPTAQIIDFQKIRVQELLKPEDHEEGRMPRTVECELTQDLVDACIPGDVVTVTGIIRGINTYMDIGGGRSKNRNQGFYYLYLEAVSVKNSKSQSTSEDLQDSNPTARPTELFDLFTFSSKDLEFVVKFAEEHGSDLFRQILQSICPSIYGHELVKAGITLSLFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSSEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHAGYGQHSPALKKQRGNPPSDSRTTLSQNTEGVDLHVRSGSLVSRLRLDPRRDRDFVPLPGQLLRKYIAYARSYVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLRVDITAQDAMDVVEIMKESLYDKYVDEHGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFLVSEIYSLADRIGLKVSDIDTFIDNLNSAGYLLKKGSKTYQVLSSSYSRSQSFRSRS* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0450 806 Gene3D - 170 220 - -
Lan19g0450 806 CDD MCM8 353 704 - -
Lan19g0450 806 MobiDBLite consensus disorder prediction 564 590 - -
Lan19g0450 806 SMART AAA_5 393 545 IPR003593 -
Lan19g0450 806 SMART mcm 139 706 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 Gene3D - 143 272 IPR012340 -
Lan19g0450 806 MobiDBLite consensus disorder prediction 572 590 - -
Lan19g0450 806 Gene3D - 327 715 IPR027417 -
Lan19g0450 806 Pfam MCM OB domain 143 271 IPR033762 -
Lan19g0450 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 392 407 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 452 466 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 492 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 503 515 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 PRINTS Mini-chromosome maintenance (MCM) protein family signature 530 538 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 Pfam MCM P-loop domain 347 560 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 PANTHER DNA HELICASE MCM8 22 801 - -
Lan19g0450 806 SUPERFAMILY Nucleic acid-binding proteins 70 273 IPR012340 -
Lan19g0450 806 Pfam MCM AAA-lid domain 622 705 IPR041562 -
Lan19g0450 806 ProSiteProfiles MCM family domain profile. 349 556 IPR001208 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 711 IPR027417 -
Lan19g0450 806 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 22 801 IPR031327 GO:0003677|GO:0005524|GO:0032508
Lan19g0450 806 Coils Coil 464 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0450 Lan-Chr19 6209986 6218290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0450 16 792 Core DNA Replication Machinery Family AT3G09660 71.630 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0450 K10737 - gmx:100784549 1320.45