Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0436 ATGGCTGATGACACTGATTTTGTTAAGGATTCTGGACAAAAAGGGTTCAACCCAGCCTTGATAGTTCTCCTTGTTGTTGTTGGGTTGCTATTGACATTCCTCGTCGGAAATTATGTGCTCTACACATATGCACAGAAGACCATCCCTCCTAGAAAGAAGAAGCCAGTCTCAAAGAAGAAGCTGAAGAAAGAGAGAATGAAGCAAGGAGTTTCTGCACCTGGAGAGTAG 228 0.4342 MADDTDFVKDSGQKGFNPALIVLLVVVGLLLTFLVGNYVLYTYAQKTIPPRKKKPVSKKKLKKERMKQGVSAPGE* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0436 75 PANTHER DNA-BINDING PROTEIN S1FA2 5 75 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lan19g0436 75 MobiDBLite consensus disorder prediction 49 75 - -
Lan19g0436 75 Pfam DNA binding protein S1FA 12 75 IPR006779 GO:0003677|GO:0005634|GO:0006355
Lan19g0436 75 MobiDBLite consensus disorder prediction 51 65 - -
Lan19g0436 75 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 5 75 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Lan19g0436 S1FA 2.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0436 - - gmx:100499820 106.686