Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0434 ATGGACAAAGATACTAATTTTGAAATCCAACTCCCTCCAGGATTTAGGTTCCACCCTTCTGATGAGGAACTTATTGTTCATTATCTGAGAAACAAAGTAACATCATCTCCACTTCCTGCTTCTTTCATTGCAGAGATAGATCTTTACAAGTATAATCCATGGGAACTTCCCGGCAAAGCTTTGTTTGGGAAAGAAGAATGGTATTTCTTTACTACAAGGGACAAGAAGTATCCCAATGGAGTGAGGCCTAATAGAGCAGCTGGTTCAGGTTATTGGAAGGCTACTGGAACTGACAAACCTATTCTCACTTCATGTGATATGAAGAACATTGGAGTGAAGAAGACGCTTTTCTTTTATAAGGGATACCACCCTAAAGGATCTAAAACTGAGTGGATAATGGATGAGTATAGGTTGCATGATTCAATGATCTCAAATTCCAAACAAAGAGGGTCTATGAGACTGGATGATTGCGTGCTATGCAGGGTTAAGAAAAAAATCAGCAGCCTAAAAAGCACTTGGGAAGATTCAAATGAACTTGGTTATGAACAAACATGCCACTTTCAACAAATGAATGATAACTATAGTCCTGAACCAGTTCTCAAGAACTTTGTTCACAATGAATATCCAATGTTACCTTATATTCTTGCTTCTAATACTATTCTCCCTAATTCCATTGGTATGGCCTCAAGCACAAGCTTCCATTGCAACGATGATATAAAAGCATATGGTTCAGTGCATGAAGATAACTTAAACCTAATAGGAGCACAGTTCTTAGCATCTGCATCAGAAAGCTTCTTTATTAGTCCGTTCAAGAGAAAAGCCATTGAAGAAAATCAGTTCGACCTCTATGCTATCTCCAATGATCCATCTAATAAGAAACTAAACCAAGTTCATGATGAGAAGCAGAAACTTCAGTAG 918 0.3791 MDKDTNFEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEIDLYKYNPWELPGKALFGKEEWYFFTTRDKKYPNGVRPNRAAGSGYWKATGTDKPILTSCDMKNIGVKKTLFFYKGYHPKGSKTEWIMDEYRLHDSMISNSKQRGSMRLDDCVLCRVKKKISSLKSTWEDSNELGYEQTCHFQQMNDNYSPEPVLKNFVHNEYPMLPYILASNTILPNSIGMASSTSFHCNDDIKAYGSVHEDNLNLIGAQFLASASESFFISPFKRKAIEENQFDLYAISNDPSNKKLNQVHDEKQKLQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0434 305 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Lan19g0434 305 PANTHER NAC TRANSCRIPTION FACTOR 56 2 293 - -
Lan19g0434 305 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 293 - -
Lan19g0434 305 Gene3D NAC domain 20 171 IPR036093 GO:0003677|GO:0006355
Lan19g0434 305 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Lan19g0434 305 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0434 Lan-Chr19 5965163 5967809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0434 10 174 NAC Transcription Factor Family AT1G61110 64.162 4.10e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0434 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0434 - - gmx:100788799 448.358