Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0411 ATGAAGCTTCCTATTAAGTACCACAAGATTTTTCTTCTTCTACCCAACTATCCATGCAAAATAACATTTGAATCAAACATGAACCAGCACTTCCATTTTAGCTATGTCTTTCTTCTTTTCTTTGTTCATAATCATTATGTTTTTTCACAGAAGACTTGCCCTAATTGTGGCTCTATACAAGTTCCATACCCTTTGAGCACAGAACCAAATTGTGGTGATCCAAACTATGCTCTTCACTGTGATCAACACTCTCAAAAACTTTACTTTAACACCCTCAATGGAAGTTCCTATATGGTTCAAAAAATAATGTTTTCAACTCAACGTTTAGTGATTCAACCATCACCTTGGTTACAACAAGGTATTACTACTACTACTTCATGTGTTACACAAGACATGCCTAGAAGCAATGGTCTTTGGTTAAATCAATCACTACCTTTCAAGATAACTTCATCAAACACAGTGTTTCTACTTAACTGTTCTCCAAGACTATTAGTTTCTCCACTCAATTGCACTTCTTCTAGTCTTTGCCATCTTTACTTGGAGAGTTCAGGTCATGTTGAAACAAAAAGAGCACTAGATTGTGCAAGTGGTCTTATTCACCCTTGTTGCACTTTTGTTGCTGGTGGTGTACCTTCATCTTACAAGATTAGGCTTCATAGTTCTGGTTGCAAAGCATTCAGAAGCATCATTCATTTGGATGAATATAAGCCTCCTAATCAGTGGGAAGAAGGCCTTGAAATTCAATGGGATCTTCCACAGGAACCAATATGTAAGACACAAAGGGGTTGTTCTAAAGATTCTAAGTGTTCCACTTATGGTAGGTGTCTTTGTAATAAGGGACACCATTGGGACCCTTTTGTGGCTACTTGCTTGAGGTACAAGAAAAAACCCAAATGGAAAACCAACTTGGTTGTCTCAATAGGGGTTGTTACTTTTTTATCTCTAGCTATAGTTCTAGCCATCAAAACTAGGTCTTGCAAAGTCTCTAACTATGTGGTGAAGCATGAGAAAGAAAGAGAAGAACATGTGCTGAAATCAAGAGATGGAGAGAAACCTTGTAGGATGTTTCAAATGAAAGAGATGAAGAAAGCAACAAATGATTTTTCTCAAGAGAGGATGTTAGGGAGTGGTGGCTTTGGTGAAGTTTATAAAGGTGAACTCCAAGATGGGACTATTGTAGCTGTCAAAAAAGCTAAAGTTGGTAACTTGAAAAGCACTCAACAAGTGCTTAATGAGGTTGAAATTCTCTCCCAAGTTAATCACAAAAACCTAGTTAGACTCTTAGGTTGTTGTGTTGAATCTGAGCAACCACTTATGGTCTACGAATATATCTCAAATGGGACCCTCTATGACCATCTTCATGCTATAAGGTATTCCAATTTCCTAGACTTGAAAACAAGGTTGAAAGTTGCTTTTCAAACTGCTGAAGCATTGGCTTATTTGCATTCTTCAGCACACACTCCTATTTACCATAGGGATGTTAAGTCCACAAACATATTACTAGATGATGAATTTAATGCAAAAGTCTCAGATTTTGGACTCTCAAGATTGGCTAACCCAGGACTTAGTCATGTTTCAACATGTGCTCAAGGAACATTAGGGTACTTGGATCCTGAATATTATAGAAACTATCAATTAACTGATAAAAGTGATGTTTATAGTTATGGTGTTGTGTTGCTTGAGCTTTTAACTTCAAAGAAAGTGATAGATTTTTCTAGGGACCAAGATGATGTTAATCTAGCAATTCATGTTACTCAACATGCAAGGAATGGTACAATCATGGAAGTGGTGGATCAAAGGCTTATTTCTTTGGAGAGTGATGAAAATATGATAGCAAGTATAAGACTATTGTTGGAGCTTGCACTTGATTGCTTGAGGGAGAAGAAAGGTGAAAGGCCTAGCATGAAGGATATTGTTCAAAGGCTCCTATGCATAATTAGGATAGTAGATCATGATATACTTGATTGA 1968 0.3699 MKLPIKYHKIFLLLPNYPCKITFESNMNQHFHFSYVFLLFFVHNHYVFSQKTCPNCGSIQVPYPLSTEPNCGDPNYALHCDQHSQKLYFNTLNGSSYMVQKIMFSTQRLVIQPSPWLQQGITTTTSCVTQDMPRSNGLWLNQSLPFKITSSNTVFLLNCSPRLLVSPLNCTSSSLCHLYLESSGHVETKRALDCASGLIHPCCTFVAGGVPSSYKIRLHSSGCKAFRSIIHLDEYKPPNQWEEGLEIQWDLPQEPICKTQRGCSKDSKCSTYGRCLCNKGHHWDPFVATCLRYKKKPKWKTNLVVSIGVVTFLSLAIVLAIKTRSCKVSNYVVKHEKEREEHVLKSRDGEKPCRMFQMKEMKKATNDFSQERMLGSGGFGEVYKGELQDGTIVAVKKAKVGNLKSTQQVLNEVEILSQVNHKNLVRLLGCCVESEQPLMVYEYISNGTLYDHLHAIRYSNFLDLKTRLKVAFQTAEALAYLHSSAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSKKVIDFSRDQDDVNLAIHVTQHARNGTIMEVVDQRLISLESDENMIASIRLLLELALDCLREKKGERPSMKDIVQRLLCIIRIVDHDILD* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0411 655 SMART serkin_6 368 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0411 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Lan19g0411 655 ProSiteProfiles Protein kinase domain profile. 368 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0411 655 SUPERFAMILY Protein kinase-like (PK-like) 351 642 IPR011009 -
Lan19g0411 655 Gene3D Phosphorylase Kinase; domain 1 327 443 - -
Lan19g0411 655 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 42 652 - -
Lan19g0411 655 ProSitePatterns Protein kinases ATP-binding region signature. 374 397 IPR017441 GO:0005524
Lan19g0411 655 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 42 652 IPR045274 GO:0007166
Lan19g0411 655 Pfam Wall-associated receptor kinase galacturonan-binding 53 111 IPR025287 GO:0030247
Lan19g0411 655 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
Lan19g0411 655 CDD STKc_IRAK 374 642 - -
Lan19g0411 655 Pfam Protein kinase domain 369 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0411 Lan-Chr19 5395867 5397986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0411 53 655 Receptor kinase-like Gene Family AT5G02070 46.203 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan19g0411 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0411 - - gmx:100804678 997.267