Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0399 ATGATGGCTCAGAAATACTTACATGAGTTACTTGAGGAGGATCAAGAACCGTTCTTTCTAAACAAGTACATTTCCGAAAAGCGTAGCCAAATCAAAACTCAAATTTCCCCACGAAAAAAACACAAACCACTTCAACATAACTCAAATTTCCCCACGAATCTATGCAAAAACGTGTGCCTTTTCTCATTTCCAGATACAACAACCCCAGACCTCAGAAAATCACCACTCTTCGAATTTCAATCCCCTTCAGCAACAAAAACCAAAAGCCCCATCAAGTTCCACATCCCTTCTCGAACCGCGAATCTTCTCCTTGAAGCAGCTCTTAAGATTCAAAAGCACTCTTCCAAAACCAAAACCCAAAACAAAAGCAATGGTTTTGGGCTATTGGGGTCTTTGTTCAAGAGACTAACACATCGAAACCAGAAAAGAAAGGAAATTGAGGGTAGTCATGTAAATTTATCTGTGAAGGATATTTTGAAGTGGGAATCTAGAAAAAACTCAAATGGGTGCATGAAAGAGCAAGAAAATTTGGATTTTTGCAATGGAAGAAGGAGTGCTGTTTGGTCAGAGAGTAATGAAGATAAATCTTTGGACATGGAAACATCGAGTAGCAGCAGCAGTAGGCACTGTGATGATGATTCTGAGTTACAAGAGATTGAGTTTGTAACAAATCAGAAACATGATATAGAATGTGTTTGCTTTCATGATATCAATGGCTTCTGTAATAGCCCTTTCCGTTTTGTTCTTCAGAGAAGCCCCTCTTCCGACCGCCACACGCCGGATCTACCATCGCCGGCACAGTCACCGGGCCGCCACATAAAAGAGGACAAAGAAAGTAATGGAGGAGAAGAGGAGGAAGAGGATAAGGAACAGTGTAGTCCAGTGTGTGTTTTGGATCCACCCTTCGAGGACGATGACGAAGGGCAAGGAAACGAAGAAGAAGAAGAAAATGATGATGATGATGATGATGATGATGAGGAAAGTTCTGATTTGAGGTGCAGCTATGCCATTATGCAGAGAGCTAAGCAACAACTATTGTACAAGCTTCATAGATTCGAGAAACTTGCAGAGTTAGATCCAGTAGAACTTGAGAAAAGAATGCTCGAGGACGAAGGTGAAGCATTTATGGAAGAGGATGATGATCATGACGACGAGGATAGTGAAGCATCATATAAAGAAAATGAGTTTATAGAACTAGTTTTTGAATCTATGTGCCATTCAAGTGTCCATGACAAAGGGCAAATCCCACAGGAACTTAAGAAACTGGTTTCGGATCTCATCGCGGAGGAATATAGAGAACTTAATTCCTTAGAAAATAAGGAGATGGTGATAAGAAGGGTATGCAAGAGGCTAGAATTATGGAAAGAAGTGGAGTGTAACACAATTGATATGATGATAGAAGAGGACTTCTCTAGAGAGAATGGTGAGTGGAAGAAAAATATGGTGCAAGTAAAAGAGATGGCTGGTGAGCTTGAACTTGCTATTTTTGGATTTCTAGTGGATGAATTTTCAGAAGAACTAGTATGTTAA 1530 0.4026 MMAQKYLHELLEEDQEPFFLNKYISEKRSQIKTQISPRKKHKPLQHNSNFPTNLCKNVCLFSFPDTTTPDLRKSPLFEFQSPSATKTKSPIKFHIPSRTANLLLEAALKIQKHSSKTKTQNKSNGFGLLGSLFKRLTHRNQKRKEIEGSHVNLSVKDILKWESRKNSNGCMKEQENLDFCNGRRSAVWSESNEDKSLDMETSSSSSSRHCDDDSELQEIEFVTNQKHDIECVCFHDINGFCNSPFRFVLQRSPSSDRHTPDLPSPAQSPGRHIKEDKESNGGEEEEEDKEQCSPVCVLDPPFEDDDEGQGNEEEEENDDDDDDDDEESSDLRCSYAIMQRAKQQLLYKLHRFEKLAELDPVELEKRMLEDEGEAFMEEDDDHDDEDSEASYKENEFIELVFESMCHSSVHDKGQIPQELKKLVSDLIAEEYRELNSLENKEMVIRRVCKRLELWKEVECNTIDMMIEEDFSRENGEWKKNMVQVKEMAGELELAIFGFLVDEFSEELVC* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0399 509 Coils Coil 420 440 - -
Lan19g0399 509 MobiDBLite consensus disorder prediction 190 213 - -
Lan19g0399 509 PANTHER OS04G0572500 PROTEIN 1 509 - -
Lan19g0399 509 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 509 - -
Lan19g0399 509 MobiDBLite consensus disorder prediction 251 329 - -
Lan19g0399 509 MobiDBLite consensus disorder prediction 300 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0399 Lan-Chr19 5113004 5117181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0399 1 303 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 39.943 1.60e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0399 - - gmx:100790018 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0381 9 5656370 5661416 Lan19g0399 19 5113004 5117181 LSH
Lan19g0399 19 5113004 5117181 Lan20g1146 20 15494223 15497438 PCT
Lan20g1146 20 15494223 15497438 Lan19g0399 19 5113004 5117181 PCT