Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0388 ATGGAGGAAGAGAATTCAACTTCTTCAGGGTATAAGGAATACATGGCAGGCTTGCTGGCTGGGGTTTCAACTGTAGCCATTGGCCACCCCTTTGACACCGTCAAGGTGAAGCTGCAAAAGCACAACACAGAAGCACATGGGATTCAGTATAGAAGTGCACTGCATTGCACTGTTAGGATATTGAAGAATGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGTTGGGATGGCTTTTGAAAGTTCACTTCTTTTTGGCATTTATTCCCAGACAAAACAGTCCCTTCAGGGGGCTGAGCAAAGTGGTGTACCACAACCCCGAGTGATAATACCATCTGCGGCCTATGGTGGTGCTATTATCAGTTTTGTGTTATGCCCAACAGAGCTGGTAAAGTGTAGGATGCAGATCCAAGGCACCGATTCTTTGGTTCCCAAATCCAGTCGATACAGCAGTCCCCTTGACTGTGCCATTAAAACTGCAAAAACTGAAGGGGTGACAGGAATATTTCGTGGAGGTTGTACAACACTGCTTAGAGAATCTATCGGGAATGCCGTCTTTTTCAGCGTATACGAATATGCACGCTATCACATGCATTCATATGTCAAAGCTTCTAAGTCTAATCACAGCAACCTCACTGATATTGGAATTGGTATTGTTACCGGTGGTCTTGCTGGTGTATCATTTTGGTTGGCAGTTTTGCCCCTTGATGTGGCAAAGACTTTAATTCAAACAAACCCTGATAAACACTGTTCAAGGAATCCTTTTCAGGTCCTTAGTTCGGTTTACAATAGGGCTGGATTGAAGGGGTGCTATGCAGGTCTGGCTCCTACAGTAACTAGAGCATTTCCGGCAAATGCAGCAGCAATCGTCACATGGGAGCTAGCAATGAAATTATTAGGGATTAAGCATGACTGA 924 0.4426 MEEENSTSSGYKEYMAGLLAGVSTVAIGHPFDTVKVKLQKHNTEAHGIQYRSALHCTVRILKNEGIKGLYRGATSSFVGMAFESSLLFGIYSQTKQSLQGAEQSGVPQPRVIIPSAAYGGAIISFVLCPTELVKCRMQIQGTDSLVPKSSRYSSPLDCAIKTAKTEGVTGIFRGGCTTLLRESIGNAVFFSVYEYARYHMHSYVKASKSNHSNLTDIGIGIVTGGLAGVSFWLAVLPLDVAKTLIQTNPDKHCSRNPFQVLSSVYNRAGLKGCYAGLAPTVTRAFPANAAAIVTWELAMKLLGIKHD* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0388 307 Gene3D Mitochondrial carrier domain 1 115 IPR023395 -
Lan19g0388 307 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 134 306 - -
Lan19g0388 307 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 7 134 - -
Lan19g0388 307 Gene3D Mitochondrial carrier domain 116 307 IPR023395 -
Lan19g0388 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 97 IPR018108 -
Lan19g0388 307 PANTHER - 7 134 - -
Lan19g0388 307 PANTHER - 134 306 - -
Lan19g0388 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 301 IPR018108 -
Lan19g0388 307 SUPERFAMILY Mitochondrial carrier 9 296 IPR023395 -
Lan19g0388 307 Pfam Mitochondrial carrier protein 221 303 IPR018108 -
Lan19g0388 307 Pfam Mitochondrial carrier protein 116 200 IPR018108 -
Lan19g0388 307 Pfam Mitochondrial carrier protein 10 99 IPR018108 -
Lan19g0388 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 199 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0388 Lan-Chr19 4888287 4893254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0388 28 302 Antiporters AT1G79900 29.861 4.73e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0388 K15109 - jre:109020136 509.22