Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0364 ATGGCGGCTTTCAGAAAACTTATATTCTCTAATCGTTCTTTGTTTCCTCCTTCCCCTTTTCTTCTCTCTTTCCGCAGAGGAATTGCTTTCAGACTTTTCGTCGGAGGATTGTCCTACTTTACAACAGAGAAAGTATTGTCAGATGCATTCTCTAATTATGGACAAGTTGTTGAAGCTAAAATTATAACCGATAGGATGTCAGAAAAATCTAAAGGGTTTGGATTTGTCACCTTTGCTTCACAGGATGAGGCTGAGAATGCCATAACAGAGATGAATGGAAAGGCACTAAATGGACGTGTAATCTTTGTTGATTATGCTAAACTTTCGACCAAGACGGGTGGTGGTGGAATGCCAATTGCTAGAGGACCTCCTGAACCAGCTCCTGAACCAACACCCGCACCAACACCAGACAGTTGA 417 0.4221 MAAFRKLIFSNRSLFPPSPFLLSFRRGIAFRLFVGGLSYFTTEKVLSDAFSNYGQVVEAKIITDRMSEKSKGFGFVTFASQDEAENAITEMNGKALNGRVIFVDYAKLSTKTGGGGMPIARGPPEPAPEPTPAPTPDS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0364 138 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 101 IPR000504 GO:0003723
Lan19g0364 138 SMART rrm1_1 31 104 IPR000504 GO:0003723
Lan19g0364 138 MobiDBLite consensus disorder prediction 113 138 - -
Lan19g0364 138 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 30 108 IPR000504 GO:0003723
Lan19g0364 138 SUPERFAMILY RNA-binding domain, RBD 30 111 IPR035979 GO:0003676
Lan19g0364 138 PANTHER TRANSFORMER-2-RELATED 1 128 - -
Lan19g0364 138 Gene3D - 28 126 IPR012677 -
Lan19g0364 138 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 128 - -
Lan19g0364 138 MobiDBLite consensus disorder prediction 121 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0364 Lan-Chr19 4496973 4499408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0364 30 107 Eukaryotic Initiation Factors Gene Family AT2G23350 34.615 3.10e-09 52.4