Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0357 ATGCACCACCGTCACCTCCTCCTCTTCCTCCTCCTTCTCCTCCCATCTCTTTCCCTCTCCACCACTGATCCAAACGACGTAGCAATCCTCCTCCAATTCAAGAAAACACTGAAAAACCCTGAACTGTTACCATGGCCTGAATCTAACGACCCTGACCCATGTGGTTCTCCTCAGTGGAAATACATCTTCTGCGATGGTAATAGGGTTTCTCAGATTCAAGTTAAGAACTTGAACCTCTCTGGTCCCTTACCTCAAAATTTTAACCAACTTTCTAAACTTAATAACCTTGGTCTTCAAAATAATCACCTTAATGGTCCTCTTCCAACTTTTCGTGGCTTATCTAATTTAGAAAAGGCTTTTCTAGATTTCAATGATTTTGATTCTATCCCTTTTGATTTCTTCGATGGGTTAACGAGTCTTGATGAATTTGCATTGGATTATAACAATCTCAATGTTAGTACCGGGGGTTGGAATTTTCCACCTTTGTTGGAGAATTCAACGCAGTTGAGAAAATTATCATGTACGAGCTGCAATTTAGTGGGTTCTGTTCCTGAATTTCTAGGAAAAATGAACTCTTTAACGGATTTGAAGCTATCTGGGAACAATTTGAGTGGAGAGATTTCGGCGAGTTTAAACGGTTCCGGTTTGCAGATTCTGTGGTTGAATAACCAGATGGGTAATGGTATAAGTGGGACTCTTGATGTTGTGACAACAATGGTTTCTCTTGAAAGTTTATGGCTTCATGGGAACAAGTTCACTGGGTCTATTCCTGAGAGAGTTGGGGATTTGGTTTCTTTGAAGGATTTCAACCTCAATGGTAATCAACTTGTTGGGTTGATCCCTGATGCTTTAGGTAATTTGCAATTGGATAATCTTGATTTGAACAATAATCACTTCATGGGTCCGATCCCGAATTTTAAAGCGACTAATGTCACTTATGAGTTTAATGATTTTTGTGAAACAAAACCCGGGGTTCCATGTGCTTTTGAAGTTATGGCATTATTGGGGTTTTTAAATGGATTGAATTATCCTTCAAATCTGGTGAATTCATGGATTGGTGATGACCCATGTAAAGGGGAATGGCTTGGGATTAATTGCAATGCAAATGGAAAGGTGTCTATGATTAATTTGCCTAACATGAAATATAATGGTACTTTGAGTCCTTCGGTTGCGAATTTAGGTTCTCTTGTTGAAATCAGATTAGGGGGTAATAATCTCAGTGGTATAGTTCCTAGTAATTGGACTAGCTTGGCATCACTGAATTTGTTGGATCTGAGTGGCAATAACATTTCCCCACCCCTACCTAAGTTTAGTAATACTGGCTTGAAATTTGTAACTGATGGGAATCCTCTTTTGAATGGTAACTCGGAGGCTCCTACATCGGGGAGCGAGAGCCCTTCATCTGGTGGATCTAGAAATGCTGAACCTTCACCAAAGTCAACACCAGAAGACTCAAATTCCAATTCAAGTGGTTCTCTTGAAACCAAAAATTCCAAAAGAAAAGTGTTGGTTTCGATTGTGGCCCCAATAGCGGGTGTGACGGCTGCAGCTTTTTTGCTCATTCCCCTTTATGCATATTGTTTCAGGAGGAGAAAGGTTAGCTTCAAGGCTCCAAGTTCACTGGTCATTCACCCTAGAGATCCATCTGATTCAGACAGTACGGTAAAGATTGTTGTTGCTAATAATAACAATGGAAGCATTTCCACCATAACGGGGAGTGGGTCCGGGAGTATAAACAGCAGTACAACCGGGAGCTGTCATACCATTGAATCTGGAAATCTCGTGATATCAATTCAAGTATTACGAAATGTTACCAAGAATTTTGCCCCTGAGAATGAGCTTGGCCGTGGTGGATTTGGGGTTGTTTATAAGGGAGAATTGGATGATGGGACTAAAATTGCAGTAAAACGAATGGAAGCTGGTGTGATTAGTAGCAAAGCCTTAGATGAATTCCAGGCTGAAATTACGGTTCTATCAAAAGTTCGTCATCGGCATCTAGTGTCCCTTTTGGGTTATTCCACTGCAGGAAATGAGAGAATTCTAGTTTACGAGTATATGCCACAAGGGGCTCTCAGTCAGCATCTTTTCCATTGGAAGAGATTAAAACTGGAGCCCCTCTCTTGGAAAAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATACACTGGCTCACCAGAGCTTCATTCACAGAGATCTTAAGTCATCAAATATTTTGCTCGCCGATGATTTTAGAGCAAAAATCTCAGATTTTGGATTGGTAAAACTTGCTCCCGATGGAGAAAAATCTGTAGTTACCCGGCTTGCTGGGACTTTTGGATACTTGGCACCAGAATATGCAGTCACAGGAAAAATCACTACCAAAGTAGATGTTTTCAGTTTTGGGGTTGTTCTAATGGAGCTGTTGACTGGATTGGTGGCACTTGATGATGATAGACCTGAGGAAAGCGAATATTTGGCATCATGGTTCTGCCATATAAAATCCGATAAGGAGAAACTAATGGCTGCTATTGACCCAGCCCTTGATCTGAAGGAGGAAACATTCGAGACCGTCTCTGTCATTGCTGAGCTAGCTGGGCACTGCACTGCTAGAGAACCAGGCCAACGACCAGATATGGGTCACGCCGTGAATGTCCTGGCACCGCTAGTTGAAAAATGGAAACCATTTGATGACGACACGGAGGAGTATTCCGGCATCGATTATAGCCTCCCTCTTAATCAGGTGGTGAAGGGTTGGCAGGAGGCAGAGGGAAAGGACATAAGTTATGTGGACCTCGAAGCCAGTAAGAGTAGTATCCCGGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCAGCCGATGGCCGGTGA 2865 0.4223 MHHRHLLLFLLLLLPSLSLSTTDPNDVAILLQFKKTLKNPELLPWPESNDPDPCGSPQWKYIFCDGNRVSQIQVKNLNLSGPLPQNFNQLSKLNNLGLQNNHLNGPLPTFRGLSNLEKAFLDFNDFDSIPFDFFDGLTSLDEFALDYNNLNVSTGGWNFPPLLENSTQLRKLSCTSCNLVGSVPEFLGKMNSLTDLKLSGNNLSGEISASLNGSGLQILWLNNQMGNGISGTLDVVTTMVSLESLWLHGNKFTGSIPERVGDLVSLKDFNLNGNQLVGLIPDALGNLQLDNLDLNNNHFMGPIPNFKATNVTYEFNDFCETKPGVPCAFEVMALLGFLNGLNYPSNLVNSWIGDDPCKGEWLGINCNANGKVSMINLPNMKYNGTLSPSVANLGSLVEIRLGGNNLSGIVPSNWTSLASLNLLDLSGNNISPPLPKFSNTGLKFVTDGNPLLNGNSEAPTSGSESPSSGGSRNAEPSPKSTPEDSNSNSSGSLETKNSKRKVLVSIVAPIAGVTAAAFLLIPLYAYCFRRRKVSFKAPSSLVIHPRDPSDSDSTVKIVVANNNNGSISTITGSGSGSINSSTTGSCHTIESGNLVISIQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQAEITVLSKVRHRHLVSLLGYSTAGNERILVYEYMPQGALSQHLFHWKRLKLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKISDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLVALDDDRPEESEYLASWFCHIKSDKEKLMAAIDPALDLKEETFETVSVIAELAGHCTAREPGQRPDMGHAVNVLAPLVEKWKPFDDDTEEYSGIDYSLPLNQVVKGWQEAEGKDISYVDLEASKSSIPARPTGFADSFTSADGR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0357 954 MobiDBLite consensus disorder prediction 448 495 - -
Lan19g0357 954 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Lan19g0357 954 SUPERFAMILY L domain-like 21 306 - -
Lan19g0357 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Lan19g0357 954 ProSiteProfiles Protein kinase domain profile. 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0357 954 SMART LRR_typ_2 239 262 IPR003591 -
Lan19g0357 954 SMART LRR_typ_2 393 416 IPR003591 -
Lan19g0357 954 SMART LRR_typ_2 113 136 IPR003591 -
Lan19g0357 954 SMART LRR_typ_2 190 214 IPR003591 -
Lan19g0357 954 SMART LRR_typ_2 263 286 IPR003591 -
Lan19g0357 954 SMART LRR_typ_2 417 441 IPR003591 -
Lan19g0357 954 SMART serkin_6 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0357 954 CDD STKc_IRAK 614 887 - -
Lan19g0357 954 Gene3D Phosphorylase Kinase; domain 1 570 685 - -
Lan19g0357 954 Gene3D Ribonuclease Inhibitor 23 325 IPR032675 -
Lan19g0357 954 PANTHER OSJNBA0070M12.3 PROTEIN 3 954 - -
Lan19g0357 954 SUPERFAMILY L domain-like 330 436 - -
Lan19g0357 954 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 3 954 - -
Lan19g0357 954 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Lan19g0357 954 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Lan19g0357 954 SUPERFAMILY Protein kinase-like (PK-like) 585 884 IPR011009 -
Lan19g0357 954 Pfam Protein tyrosine and serine/threonine kinase 611 882 IPR001245 GO:0004672|GO:0006468
Lan19g0357 954 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Lan19g0357 954 Gene3D Transferase(Phosphotransferase) domain 1 686 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0357 Lan-Chr19 4428687 4432625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0357 63 889 Receptor kinase-like Gene Family AT5G07280 31.579 3.21e-80 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan19g0357 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0357 - - gmx:100305366 1399.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1075 5 24067917 24079245 Lan19g0357 19 4428687 4432625 LSH