Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0337 ATGTGTTGGCAACCTATTAAACTGAAGGATCCTTCTAGTCAAGAATTGTTCGAAGCGGTAGAGCATGAAAGGAGCTTGAGGGACAGACCATCAAGAAATGCTGCTATTTTTCATCACCCTGCTTTTGGCGATTTTGACTTCCAGCCGTTACGCATGGGTGACACTGATTTCGAAGAGCAAATAATTCAACATTTAGCTGCTGCTGCAATGGGGAGAGCACACCACCTTGGTCGGAGGGAAGGGATATGTGAACACATTTTTGTTTTGAGAGGCTTTGCTGCTCATTCTTCACCGGTAAACCAAGATGGAGCAGGGCCATCAGAATTCCAATCATTTTCTGATTCTCTACGGTCCAAACTTAATGCAGTCTCCATGAGATACAAAGATTCAATTTCAAAAGGCACGAAGGGATGGAAGGAGAGACTGTTCTCTCGTACTTCTTCCATGCCAGAATTTGGTTCAGAAGCTAGGAGTGAGGCAAATGTTGGCATTGCTAGTGTATCCCGATTGGTGGAATTCCTTCAAACTAGAGAAAATAATAGAGTTGTGGGTACTTCTTTGTCAAATCATTTGGAGGATCGCTCTATTGTAGACGGGTCGAGCAACCAGAACAATGTTGAAGGCAGTCGAGAGAACTTTTCACATAATAACAATACTCCAGCTGCTTGTTCTGCTGGCTCACATTCAAGTTGA 693 0.4358 MCWQPIKLKDPSSQELFEAVEHERSLRDRPSRNAAIFHHPAFGDFDFQPLRMGDTDFEEQIIQHLAAAAMGRAHHLGRREGICEHIFVLRGFAAHSSPVNQDGAGPSEFQSFSDSLRSKLNAVSMRYKDSISKGTKGWKERLFSRTSSMPEFGSEARSEANVGIASVSRLVEFLQTRENNRVVGTSLSNHLEDRSIVDGSSNQNNVEGSRENFSHNNNTPAACSAGSHSS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0337 230 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 90 229 - -
Lan19g0337 230 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 81 - -
Lan19g0337 230 MobiDBLite consensus disorder prediction 194 230 - -
Lan19g0337 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 90 229 - -
Lan19g0337 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0337 Lan-Chr19 4097278 4101622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0337 K19043 - gmx:100800419 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0351 9 5329632 5334333 Lan19g0337 19 4097278 4101622 LSH
Lan5g1062 5 23925072 23930652 Lan19g0337 19 4097278 4101622 LSH
Lan19g0337 19 4097278 4101622 Lan9g0351 9 5329632 5334333 PCT
Lan9g0351 9 5329632 5334333 Lan19g0337 19 4097278 4101622 PCT