Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0322 ATGAAGTTAATCGGCGACGGCGGATGCGGCGGCCGGAAGAAAGTATTGGTTGGAGTCAAGTTAGACGAACGGAGCACGGAATTGCTGACGTGGACACTTGTTAACGTTGCCGTGCCCGGCGACCTTGTAATTGCGCTTCACGTTCTCGAAACCATCCCTGCAGGAACAGCATCGGTGCTTTCTCTACTCAAAAGTTTCGATTCCGTTATCTCTGGTTACAAAGGCTTCTGCAATTTACAGCAGGTTGATCTTAGGCTTAAATTGTGTAGAGGTGATTCGCCTCGGAAGGTTATAGTAAAAGAGGCCAAATCTTTTGGAGTTTCGACAGTTATTCTTGGAATTTCCAAAACGCACCACACTATTTGTTCTTATTCGTTGATTGCCAAGTATTGTGCGAGGAAATTGCCTAAGTGTGTTTCTGTTTTCTCTGTTGATAATGGCAAAATTGCTTTCCAAAGAGAAGCTTCTAGAACTTGCAGTTGTGAAGAAAAAATACATGAAGGCCAAAATAGTTCACCGAATTTGTTGGTACCTTGTACGAAGAAAACTTTGAAGAATTGTGTAAGTTGTGTGAAAAGGTTCTCTGGTTATGATCTTGTAAAGGAAAATTCACTGGCTTTGGTACCTTTGCTAAAACATGATGATAGTGATCCTCCTAGTTATTCAACTGTGGCGAGTAATTCAAACCAGTTGAAATCTGGTTGTTCAATCATTGACCAAGTGCTTGAGCCCAGAAAGTGTTCACATTCAATGTCACTGAGGAAGAGAGGATTTGATTATCAACCTGCATTGCGACGACTCAACTGGAATTTTTCAGCTGTTGTCCATCCAGATCATAAACAGACTAATGATGACAAAAATAATGATTCCACCCTTTATGGGGAGAGTGGTGCTATTGTTGCATTTGGGTTTGCTAATTTTCTTCATCCTTCGATATGTGGTCAAGTGACTAGTCTTCCTGAAGAATTGTTGGGCTTACAAAAGAAGTATTCATCCTTATGCAGAATATATAGTTTGCAGGAACTTGTATTTGCAACCGCTAACTTCTCATCCGAAAATTTGGTTGGAAAAGGTGGTAGTAGTTATGTTTACAGAGGATGTCTACCGGATGGCAAGGAATTGGCTGTGAAAATTTTAAAGCCATCTGAAGATGTGGTAAAAGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCATCACAAGAACATAATACCTCTATCTGGCTTTTGTTTTGAGAGAAACCATTTACTACTGGTTTATAAATTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGTGATAAGAAGGACCGTAATGCACTTGGTTGGCAAGAGAGGTACCAGGTGGCTGTCGGTGTAGCTGAGGCATTGGATTATCTGCATAATGGTTGTGCGAAGGCGGTGATCCATAGGGATGTTAAATCTTCCAATATCCTTCTTTCAGCTGATTTTGAGCCTCAGCTCTCAGATTTTGGACTGGCTAGTTGGAGTTGTTCTTCTTCCCATATTACTTCTATTGATGTAGCCGGAACTTTTGGATACCTAGCTCCTGAATACTTTATGCACGGTAAAGTGACCGACAGAATTGATGTATATGCTTTTGGTGTTGTACTCCTCGAGCTTCTCTCAAATAGGAAACCCATAAACAATGATTGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACTCCAATTTTGAAAGATGGGAAGATTTCTGATTTGCTTGATCCTAGCCTAGGCATTGAATACGACCATGGCCAGATTAAAAGGATGGTTTTGGCTGCTACTCTTTGCATTAGACGAGCACCTAGATCACGACCTGAAATTAGCCTTATACTAAAACTTTTACAAGGTGATGAAGAAGTAACAAGATGGGCAGAACAAGAAGTTAGTGCACCACAAGAATTCGATGGAGCTGATGGGGAACCGGTTGCGATTAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACTTGAATGATGATGCATTTTCTACCAGTAGCACTGCGCAAAATATCTCATTGGAGAACCATTTGCTGGGAAGATGGAGTGACTCTTCATGTTCTGACTAA 2082 0.4121 MKLIGDGGCGGRKKVLVGVKLDERSTELLTWTLVNVAVPGDLVIALHVLETIPAGTASVLSLLKSFDSVISGYKGFCNLQQVDLRLKLCRGDSPRKVIVKEAKSFGVSTVILGISKTHHTICSYSLIAKYCARKLPKCVSVFSVDNGKIAFQREASRTCSCEEKIHEGQNSSPNLLVPCTKKTLKNCVSCVKRFSGYDLVKENSLALVPLLKHDDSDPPSYSTVASNSNQLKSGCSIIDQVLEPRKCSHSMSLRKRGFDYQPALRRLNWNFSAVVHPDHKQTNDDKNNDSTLYGESGAIVAFGFANFLHPSICGQVTSLPEELLGLQKKYSSLCRIYSLQELVFATANFSSENLVGKGGSSYVYRGCLPDGKELAVKILKPSEDVVKEFVQEIEIITTLHHKNIIPLSGFCFERNHLLLVYKFLSRGSLEENLHGDKKDRNALGWQERYQVAVGVAEALDYLHNGCAKAVIHRDVKSSNILLSADFEPQLSDFGLASWSCSSSHITSIDVAGTFGYLAPEYFMHGKVTDRIDVYAFGVVLLELLSNRKPINNDCPKGQESLVMWATPILKDGKISDLLDPSLGIEYDHGQIKRMVLAATLCIRRAPRSRPEISLILKLLQGDEEVTRWAEQEVSAPQEFDGADGEPVAINIQSHLNLALLDLNDDAFSTSSTAQNISLENHLLGRWSDSSCSD* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0322 693 PANTHER OS01G0253100 PROTEIN 13 686 IPR045271 GO:0004714|GO:0006468
Lan19g0322 693 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 115 - -
Lan19g0322 693 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0322 693 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Lan19g0322 693 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
Lan19g0322 693 Pfam Protein kinase domain 351 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0322 693 Pfam Universal stress protein family 12 136 IPR006016 -
Lan19g0322 693 SMART serkin_6 349 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0322 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lan19g0322 693 SUPERFAMILY Protein kinase-like (PK-like) 330 619 IPR011009 -
Lan19g0322 693 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Lan19g0322 693 CDD USP_Like 14 139 - -
Lan19g0322 693 Gene3D HUPs 12 142 IPR014729 -
Lan19g0322 693 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 13 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0322 Lan-Chr19 3899868 3903389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0322 337 626 Trihelix Transcription Factor Family AT5G38560 42.617 6.74e-73 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan19g0322 Pkinase 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0322 - - gmx:100815722 922.154