Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0306 ATGCCTGCAGGTCATGGTTTGAGATCACGCACCAGAGACTCGTTCTCTCGCGCTTTCAGGAAGAAGGGTACAATCCCTCTCACCACTTACCTCAGGACCTATCACATCGGTGAACACGTTGATATCAGGGTTAATGGCGCCGTTCACAAAGGTATGCCTCACAAGTTCTACCATGGCCGTACCGGTCGTGTCTGGAATGTCACCAAGCGCGCCATTGGTGTCGAAGTTAACAAACAGGTTGGAAACAGAATTATCAGGAAGAGAATCCATGTTCGCATCGAGCATGTGATGCCATCAAGGTGCAATGAGGAGTTCCGTCTCAGGAAGGTTCAGAATGACAAATTGAAGGCCGAGGCCAAGGCTAAGGGTGTTGTGATCAGCACCAAGAGGCAGCCTGAAGGACCTAAACCAGGGTTCAAGGTTGAAGGCGCTACCTTGGAGACTGTCACTCCCATTCCATATGACGTTGTCAACGATCTTAAAGGCGGTTATTAG 495 0.499 MPAGHGLRSRTRDSFSRAFRKKGTIPLTTYLRTYHIGEHVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRIEHVMPSRCNEEFRLRKVQNDKLKAEAKAKGVVISTKRQPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0306 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 164 - -
Lan19g0306 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Lan19g0306 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lan19g0306 164 Gene3D - 99 156 - -
Lan19g0306 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 164 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lan19g0306 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lan19g0306 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0306 Lan-Chr19 3410572 3412008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0306 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G57860 80.488 1.23e-100 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0306 K02889 - gmx:100305629 313.923