Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0299 ATGTCGCAGAAGAAGAAAGCTAGGGTTTCTGACGATGAACAAATGGAAGAAATTGAACATCAAAACAGCCTCTACGAGGTTCTCGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAGGCATATCATAAGTTGGCATTGCGGCTTCATCCTGATAAGAATCCTGATGATGTGCAAGCTAAAGAGAAATTCCAGCAACTGCAAAAAGTGATATCAATTCTTGGGGACGAAGAGAAACGAGCCCTTTATGATCAGACTGGTTGTGTTGATGATGATGACCTTGCTGGAGATGTTGTTCAGAACCTTCATGAGTTTTTCAGAACAATGTACAAGAAGGTGACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGATTCAGAGAAAACTGATTTGATTGATCTTTACAAGAAGTGCAAGGGTAATATGAACAGGCTTTTCTGTTCGATGCTGTGTTCAGATCCTAAATTGGACTCACACCGATTCAAGGATATTCTTGATGAGGCTATAGATGCTGGAGAAATAAAGTCAAGAAAAGCCTACCAGAAATGGGCAAAGGAGGTATCTGAAACCAAACCACCAACAAGTCCTTTAAGGAAGAGGGCAAAGTCAAGAAAGCAGCCGGAAACTGATCTGTACGCAATCATATCACAACGCCGAAATGAGAGGAAAGGCCAGTTCAATTCAATGTTCTCCTCTCTAGTTTCAAAGTATGGTGGAGGTGATATACCTGAACCCTCCGAGGAGGAATTTGAAGCTGCACAGAGAAAGCTGGAGAGCAAATCCTCTAAAAAATCAAAGAAATCAAAGCAGAAGTAA 831 0.4128 MSQKKKARVSDDEQMEEIEHQNSLYEVLGVERTASQQEIKKAYHKLALRLHPDKNPDDVQAKEKFQQLQKVISILGDEEKRALYDQTGCVDDDDLAGDVVQNLHEFFRTMYKKVTEADIEEFEANYRGSDSEKTDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIDAGEIKSRKAYQKWAKEVSETKPPTSPLRKRAKSRKQPETDLYAIISQRRNERKGQFNSMFSSLVSKYGGGDIPEPSEEEFEAAQRKLESKSSKKSKKSKQK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0299 276 MobiDBLite consensus disorder prediction 197 212 - -
Lan19g0299 276 MobiDBLite consensus disorder prediction 189 215 - -
Lan19g0299 276 MobiDBLite consensus disorder prediction 242 276 - -
Lan19g0299 276 PRINTS DnaJ domain signature 25 43 IPR001623 -
Lan19g0299 276 PRINTS DnaJ domain signature 43 58 IPR001623 -
Lan19g0299 276 PRINTS DnaJ domain signature 60 80 IPR001623 -
Lan19g0299 276 PRINTS DnaJ domain signature 80 99 IPR001623 -
Lan19g0299 276 CDD DnaJ 25 77 IPR001623 -
Lan19g0299 276 SUPERFAMILY Chaperone J-domain 22 97 IPR036869 -
Lan19g0299 276 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 274 IPR042977 -
Lan19g0299 276 Gene3D DnaJ domain 7 99 IPR036869 -
Lan19g0299 276 Pfam DnaJ domain 24 85 IPR001623 -
Lan19g0299 276 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 274 - -
Lan19g0299 276 ProSiteProfiles dnaJ domain profile. 23 88 IPR001623 -
Lan19g0299 276 SMART dnaj_3 22 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0299 Lan-Chr19 3292609 3294887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0299 25 85 C2H2 Transcription Factor Family AT1G74250 39.394 2.11e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0299 K09529 - gmx:100793909 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1025 5 23538627 23541947 Lan19g0299 19 3292609 3294887 LSH