Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0292 ATGGAGAAAGGGGCAAGTAAGAAGAAAGCTCTCTCTTTGGACCAGTTCATCTCTATTACTAATCCTCTTCTTGACTTAGAAAAGGAAGCTGAGATATCAAACTCAATTGCCACTGGCACGTCGAGGAATTTGGATCATGCTCAAAAGAGGGGCTCAACAATCCTCAACTTGAAGTGCGTGGATGTTCAGACAGGGCTTATGGGCAAATCTTTGATCGAGTTCCAGTCTACAAAAGGAGATGTTCTTCCTGCACACAAGTTTGGCACTTACGACGTTGTTGTTTTAAAGCTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGACAGGGTGTAGTTTACAGGTTAAAGGATTCATCAATAACTGTTGCCTTTGATGATATACCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTAGCAAATGAGGTTACATATCGCAGGATGAAAGATGCATTAATACAGTTGAGTAAAGGAGTGAAGGGTCCTGCCACTGATCTAGTTCCTGTCTTATTTGGGGAGAGGGTACCAACAATTTCCAAAAAGGATGCATCCTTCACTCCCTTTAATAAAAACCTCGATCATTCTCAGAAAGATGCAATTTCAAAAGCCCTATCATCGAAGAATGTGTTTTTGCTACATGGACCTCCCGGAACTGGAAAAACTACAACAGTGGTAGAAATTATATTACAAGAAGTGAAACGGGGATCTAAGATTCTGGCTTGTGCTGCCTCAAATATTGCTGTTGACAACATTGTTGAGCGGCTAGTTCCACATAGAGTTAAGCTGGTGAGAGTGGGACATCCTGCACGTTTATTGCCTCAAGTACTGGATAGTGCACTTGATGCTCAGGTACTACGAGGAGATAATAGCGGCCTTGCAAATGACATTCGGAAAGAAATGAAGGCATTGAATGGAAAGCTGCTGAAAACCAAAGACAAAAATACAAGGAGGGGCATACAAAAGGAGCTTAGGACTCTATCCAAAGAAGAGCGTAAAAGGCAGCAGCTTGCTGTAACAGATGTAATTAAAAGTGCTGATGTCGTATTGACAACTTTGATTGGGGCATTTACTAAGAAACTACAGAGCACGTCGTTTGATTTGGTGATTATTGATGAAGCTGCTCAAGCACTTGAGATAGCATGTTGGATACCTCTGCTGAAGGGTTCAAGATGCATACTTTCAGGGGACCATCTTCAACTTCCTCCAACCATTCAAAGTGTTGAAGCTGAGAAGAAAGGCTTAGGAAGAACCCTCTTTGAAAGACTTGCAGAAATGTATGGAGATGAAGTCACATCTATGCTTACTGTCCAGTACCGTATGCATGAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGCAAGGTCAAGGCTCATGCAAGTGTTGCTGCTCATATGCTGTTTGATCTTGAGGATGTGAAGAAGACATCTTCGACCGAACCAACCCTTCTTCTCATAGACATAGCTGGATGTGACATGGAAGAAAAGAAAGATGAAGAAGATAGCACCCTTAATGAAGGTGAAGCTGAGGTAGCTATGGCTCACGCAAACAGACTAGTGCAAAGTGGGGTGCTTCCTTCTGATATTGGAATTATTACTCCATATGCCGCTCAGGTTGTTTTACTCAAGATGCTGAGAAACAATGACGATCGACTAAAGGATGTTGAAATCTCAACAGTTGATGGCTTCCAGGGAAGGGAGAAAGAAGCGATTATCATATCAATGGTTCGATCCAACTCAAGGAAAGAGGTGGGCTTTTTAAGTGATCGCAGGCGAATGAATGTTGCTGTGACACGGGCAAGAAGGCACTGCTGTCTTGTCTGTGACACTGATACAGTCACCGGTGATGGGTTTCTAAAGCGGCTGATTGAGTATTTTGAAGAAAATGGCGAGTATCAGAGTGCATCCGAGTACCAGAATGAGTAG 1935 0.4269 MEKGASKKKALSLDQFISITNPLLDLEKEAEISNSIATGTSRNLDHAQKRGSTILNLKCVDVQTGLMGKSLIEFQSTKGDVLPAHKFGTYDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVKGPATDLVPVLFGERVPTISKKDASFTPFNKNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKALNGKLLKTKDKNTRRGIQKELRTLSKEERKRQQLAVTDVIKSADVVLTTLIGAFTKKLQSTSFDLVIIDEAAQALEIACWIPLLKGSRCILSGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGDEVTSMLTVQYRMHELIMDWSSKELYNSKVKAHASVAAHMLFDLEDVKKTSSTEPTLLLIDIAGCDMEEKKDEEDSTLNEGEAEVAMAHANRLVQSGVLPSDIGIITPYAAQVVLLKMLRNNDDRLKDVEISTVDGFQGREKEAIIISMVRSNSRKEVGFLSDRRRMNVAVTRARRHCCLVCDTDTVTGDGFLKRLIEYFEENGEYQSASEYQNE* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0292 644 Gene3D - 21 424 IPR027417 -
Lan19g0292 644 PANTHER HELICASE WITH ZINC FINGER 2 7 642 - -
Lan19g0292 644 Gene3D - 440 644 IPR027417 -
Lan19g0292 644 Coils Coil 295 315 - -
Lan19g0292 644 Pfam AAA domain 417 613 IPR041679 -
Lan19g0292 644 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 7 642 - -
Lan19g0292 644 SMART ultradead3 190 441 IPR014001 -
Lan19g0292 644 Pfam AAA domain 194 408 IPR041677 GO:0004386
Lan19g0292 644 CDD SF1_C_Upf1 442 630 IPR041679 -
Lan19g0292 644 CDD DEXXQc_SMUBP2 193 441 - -
Lan19g0292 644 TIGRFAM TIGR00376: putative DNA helicase 342 639 IPR004483 GO:0003677|GO:0005524
Lan19g0292 644 Gene3D - 39 141 - -
Lan19g0292 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 625 IPR027417 -
Lan19g0292 644 SMART AAA_5 208 460 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0292 Lan-Chr19 3172812 3180608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0292 154 377 Core DNA Replication Machinery Family AT1G08840 26.339 2.48e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0292 K19036 - gmx:100810545 1134.78