Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0291 ATGGATACATGCAGAAAATCCCCTTTGAAGCCATGGAAGAAAGGGCCAACTCGGGGTAAAGGCGGCCCTCAGAATGCTTCGTGCAAGTATCGAGGCGTTCGACAGAGAACATGGGGGAAATGGGTAGCTGAGATAAGAGAGCCCAAGAAGAGAACCAGGCTATGGCTTGGTTCTTTTGCTACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAAACTCTATGGACCAGATGCATACCTTAACCTTCCTCACTTGCAACCATGTTCCACTGATTCTCCTATCAAATCTGGGAAGTTCAAATGGTTGCCTTCAAAGAATTTCATGTCAATGTTTCCTTCTTGTGGATTACTCAATGTGAATGCTCAACCTAGTGTTCATTTAATCCATCAAAGGCTACAACAGTTTAAGAAAAAAGGGGTTGCAAGTCAATCATCATTCCCATTTAGTTCATCAACCAATGGTCTAAACACAGAAACTCTGAAAAGCCACCCAGAAAATCGCCCGGGAGAAAAAAATGTGCAAACATCGTCCGAAGATATGCTTGGATATTTTCAGGAGAAACCGCAGATAGACCTACATGAGTTTCTTCAACAGATGGGAATAGTGAGAGAAGAAAGGCAGACAGAAGGAACTGATAGCTCGGGAAGTTCAACAGCGGTACCTGAAGCTGTGTCGAGAGATGAGAGTGATCAACTAGGAGTGTTTTCTGACAAGAGTGTTAACTGGGAAACATTGATTGAGATGCATGAAATTGCAGGTATTCAGGAAACAGAAGGTACACAGTTCGAAGCATATGACATAAATGATGACCCCACTTTCTCCACTTCCATTTGGAATTTCTAA 852 0.4331 MDTCRKSPLKPWKKGPTRGKGGPQNASCKYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARKLYGPDAYLNLPHLQPCSTDSPIKSGKFKWLPSKNFMSMFPSCGLLNVNAQPSVHLIHQRLQQFKKKGVASQSSFPFSSSTNGLNTETLKSHPENRPGEKNVQTSSEDMLGYFQEKPQIDLHEFLQQMGIVREERQTEGTDSSGSSTAVPEAVSRDESDQLGVFSDKSVNWETLIEMHEIAGIQETEGTQFEAYDINDDPTFSTSIWNF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0291 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 279 - -
Lan19g0291 283 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 MobiDBLite consensus disorder prediction 1 28 - -
Lan19g0291 283 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Lan19g0291 283 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 279 - -
Lan19g0291 283 MobiDBLite consensus disorder prediction 209 234 - -
Lan19g0291 283 MobiDBLite consensus disorder prediction 148 165 - -
Lan19g0291 283 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 MobiDBLite consensus disorder prediction 148 178 - -
Lan19g0291 283 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Lan19g0291 283 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0291 Lan-Chr19 3171073 3172390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0291 5 283 AP2-EREBP Transcription Factor Family AT3G57600 54.064 2.04e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan19g0291 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0291 - - gmx:100801311 427.943