Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0281 ATGTCTTCTTCTTCTTCTTACCATCTGTATGATGTGTTTCTGAGTTTCAGAGGTGAAGACACTCGCAACACCTTCACTTCTTCTCTCTACTCTGCCCTCACTGACCTCACCATCCATACCTTCATGGACAAGAATCTTGAGAAAGGAACAAAGGTTAAACCTGAACTATATAGAGCAATAGAAGGGTCTAAAATATCCATGGTTGTTTTCTCACCAAGGTATGCTGGATCAAGATGGTGTCTTGATGAACTTGTGAAGATTATGGAGTGTCATAGAAGTAATGGTCAACTTGTTGTGCCTGTCTTTTATAACGTTGACCTTGCACATGTACGCCATCAGATTGGTGAATTTGGTGATTTTTATACACAGCTTCTAAGGAAACAAAGATGGGTCAATCATGCTCATGTCTTGGCTGAATGGAAGACAGCACTCATTGATGCTGCTAACTTTGTTGGTTGGCCTGTTGCATCTGACAATTACAATGTCATCAAGCTTATTGTTCAGGATATTTACCGAAGGTTAGACAGCACATCCTTGCCTATTACAGATTTTCCAGTTGGGTTAGAATCTCGTGCCCATGATGTGATTGAGCTTTTGAAAGGGAAATCAAGCGCAGTTCGTGTAATAGGGATATGGGGAATGGGAGGATCTGGTAAAACAACCTTAGCCAAAGTTATCTTCAATCAAATTCATAGGGATTTTGTAGGTACAAGTTTCCTTGCTAATATTAGAGAAGTTTGGGAGACAAATGGAGGCCAAACTGATTTACAAGAACAGTTACTTTTTGATATCCTTAAGTTAGAAAAGATGAAGATACATAACATTGAGTTGGGAAAGGCTATGATCAAGGGAAGACTGTGTGGAAGTAAAGCACTTGTTGTACTTGACGATGTCAGTAAGGACGAGCAACTACGAGCCTTATGCGGAAATCGTACATGGATTGGTCCAGGAAGTGTAGTAATTATTACAACCAGAGATGTGCGTGTACTTAATGTACTCAAAGTTGACCATGTTTCTGAAACAAAGGAATTGGATAAAAGTGAGTCCCTTGAGTTGTTCAGTTGGCATGCTTTTAGGGAAGAAAGACCAAGAAAAGACTTCATTGAACTCTCAACAAATGTAGTAGCTTATTGTGGAGGATTACCACTAGCTCTTGAAGTTCTTGGATCTTATTTGTACGAGAGGACAACACTAGAGTGGAGAAGTGTTTTGTCCAAACTAGAAATGATTCCCAATGATCGAGTGCAAGAGAAATTAAGAATAAGCTTTGACGGTTTAAGGGATCATATGGAGAAGGGTATATTTCTTGACATATGTTGCTTTTTTATTGGCAAGAACAGAACCTATGTTAGGGAGATTCTAGATGGATGTGGACTTCATGCTGAAATTGGAATAACAGTCCTTCTGGAACGGAGCCTCATAAAAGTTGAAAAGAATAACAAACTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTGTCCGTGAAAGTTCACCAGAGGAGCCTGAGAATCAGAGTCGTTTGTGGTTTCGGGAGGACGTACTTGATGTATTGAAAGAACATACTGGAACTAAAGCTATTGAGGGATTGGCTTTGAAGTTGCAAAGATCCAGTAAAGTTTGCTTCAGTACCAAGGCTTTTGAGAAAATGAAGAAGCTGAGACTTTTGCAACTAAATGGAGTACAACTTGATGGAGATTATGGATATCTTCCCAAATACCTGAGATGGGTTTATTGGGAAGGATTTCCCTTAAAGTACACACCTGACAACTTTTATCAGGGAAATATAGTTGCTATTGACTTAAGACACAGTAATCTTAAGTTAGTTTGGAAGGAGCCTCAGGTTCTAGAGAGGCTGAAAATCCTTACTCTTAGTCATTCAAGGTACTTGACAAACACCCCTGATTTCTCAAAACTGCCGAATCTTGAAAAGCTCATCCTCAAAGATTGCCCAAGTTTGTCCGAGTTACACCCATCTATTGGTGATCTCAGTAATCTTCTTCTTATAAATTTGAAAGACTGCGTGACATTAAGCAATTTCCCGAGGACGTTTTATAAGTTGAAATCTGTGAAAACTGTCATAATTTCGGGCTGTTCAAAGATTGACATATTGGAAGAAGATATAGAGCAGATGGAGTCCATGACAACTCTAATTGCAAAAGATACTGCAGTAAAACAAGTTCCCTTTTCAATAGTAAGATTGAAAAGCATCGGATATATATCCTTATGTGGATATGAAGGATTATCATCTCATGTTTTTCCTTCTCTTATTCGTTCTTGGATGTCACCAACATTTAATCCTTTATCCTCTATTGACCCATTTGGGGGCATGTCTTCCTCTCTAGTTTCCATGAATATGCATAGCAATAATTTGGTTGATCTACCTTCAATGCTTAGCAGCCTTTCAAAACTTCGAAGTGTTTGGGTGCAAAGCAGCTCAGAGTTTCAACTAACTCAAGATTTCAGAAGAATTCTGGATGGCCTATCTGATGTAAATGTTACTGAATTGGAAACATCAAAAATATCAAAGCATTCTTTGAGATCTTTTTTGATTGGAATGGGAAGTTGCAGCCAAGTCTTCAATACTCTTAGCAGTAGCATATCACAGGAATTGACCGCTAACGTTTCTAGTGATTTTTCTCTCCTGGGTGACAACTATCCTAGTTGGTTAACCTACACTGGTGAAGGAAATTCAGTACTTTTTGAAGTTCCTCAAGTTAATGATTATTGTTTGCAAGGAATGGTTTTGTGTGTTGCTTACTCATCTACCCCAGAAAACATAGCAGATGAATGTCTTACTGGTGTCTTGATTGTTAATAACACAAATTCCTTCATCCAGCTTTACAAGCGAGACACGGTGATGTCCTTGAATGATGACGAGTGGCAAGGCATAGTGTCAAGTCTTGCACCTCATGACAAAGTGGAGATTTTTGTGTCTTTCGAGCATAGATTGACTGTCAAGAAGACAACATTGTATCTAATATATGGTGACTCAATTGATGGGGAAATGGAACCATCATCAGGGTCAATGATACCGGACAAAATGTTGTTAGATCCAGATTTGACAAAGCCAAACCTGACAGAGCCAATGAAACTAGTTACAATGTTGTCAAACCTGGATCAGAAAGAGACTCGAAAAAACTCCTGGTTTTGGTGCAATTGTTTTGCTCCAAAGAAATAA 3186 0.3883 MSSSSSYHLYDVFLSFRGEDTRNTFTSSLYSALTDLTIHTFMDKNLEKGTKVKPELYRAIEGSKISMVVFSPRYAGSRWCLDELVKIMECHRSNGQLVVPVFYNVDLAHVRHQIGEFGDFYTQLLRKQRWVNHAHVLAEWKTALIDAANFVGWPVASDNYNVIKLIVQDIYRRLDSTSLPITDFPVGLESRAHDVIELLKGKSSAVRVIGIWGMGGSGKTTLAKVIFNQIHRDFVGTSFLANIREVWETNGGQTDLQEQLLFDILKLEKMKIHNIELGKAMIKGRLCGSKALVVLDDVSKDEQLRALCGNRTWIGPGSVVIITTRDVRVLNVLKVDHVSETKELDKSESLELFSWHAFREERPRKDFIELSTNVVAYCGGLPLALEVLGSYLYERTTLEWRSVLSKLEMIPNDRVQEKLRISFDGLRDHMEKGIFLDICCFFIGKNRTYVREILDGCGLHAEIGITVLLERSLIKVEKNNKLGMHDLLRDMGREIVRESSPEEPENQSRLWFREDVLDVLKEHTGTKAIEGLALKLQRSSKVCFSTKAFEKMKKLRLLQLNGVQLDGDYGYLPKYLRWVYWEGFPLKYTPDNFYQGNIVAIDLRHSNLKLVWKEPQVLERLKILTLSHSRYLTNTPDFSKLPNLEKLILKDCPSLSELHPSIGDLSNLLLINLKDCVTLSNFPRTFYKLKSVKTVIISGCSKIDILEEDIEQMESMTTLIAKDTAVKQVPFSIVRLKSIGYISLCGYEGLSSHVFPSLIRSWMSPTFNPLSSIDPFGGMSSSLVSMNMHSNNLVDLPSMLSSLSKLRSVWVQSSSEFQLTQDFRRILDGLSDVNVTELETSKISKHSLRSFLIGMGSCSQVFNTLSSSISQELTANVSSDFSLLGDNYPSWLTYTGEGNSVLFEVPQVNDYCLQGMVLCVAYSSTPENIADECLTGVLIVNNTNSFIQLYKRDTVMSLNDDEWQGIVSSLAPHDKVEIFVSFEHRLTVKKTTLYLIYGDSIDGEMEPSSGSMIPDKMLLDPDLTKPNLTEPMKLVTMLSNLDQKETRKNSWFWCNCFAPKK* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0281 1061 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 997 - -
Lan19g0281 1061 Gene3D - 7 171 IPR035897 -
Lan19g0281 1061 ProSiteProfiles TIR domain profile. 8 178 IPR000157 GO:0007165
Lan19g0281 1061 Pfam TIR domain 10 177 IPR000157 GO:0007165
Lan19g0281 1061 Gene3D - 343 427 IPR042197 -
Lan19g0281 1061 Gene3D - 172 338 IPR027417 -
Lan19g0281 1061 SUPERFAMILY L domain-like 484 814 - -
Lan19g0281 1061 PRINTS Disease resistance protein signature 208 223 - -
Lan19g0281 1061 PRINTS Disease resistance protein signature 285 299 - -
Lan19g0281 1061 PRINTS Disease resistance protein signature 378 392 - -
Lan19g0281 1061 PRINTS Disease resistance protein signature 616 632 - -
Lan19g0281 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 438 IPR027417 -
Lan19g0281 1061 SMART till_3 9 150 IPR000157 GO:0007165
Lan19g0281 1061 Pfam NB-ARC domain 195 411 IPR002182 GO:0043531
Lan19g0281 1061 Gene3D Ribonuclease Inhibitor 527 711 IPR032675 -
Lan19g0281 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 153 IPR035897 -
Lan19g0281 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 997 IPR044974 GO:0006952
Lan19g0281 1061 Gene3D Ribonuclease Inhibitor 712 877 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0281 Lan-Chr19 3062543 3067847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0281 5 774 WRKY Transcription Factor Family AT4G12020 29.790 3.23e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0281 - - gmx:100813173 1215.68