Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0280 ATGGCTGAACCATCCCTCTCTCGCATTGCTAACTCACTCATAACAAAGATCGCTTCTTCTGCTATACAAGCAGCTTCTGTAGAGATTGGTGTCTATGACGAACTTCAAGCGTTTAAAGCATCTCTTTTATCCATCAAATTTGGGATTTTGGAGGCTGAACTTAAGCAAGGACAGAACCCAGAGCTTCAAGATTGGATGATGAAGCTCAAACCTGTCTTATATGAGGCTGAAAACGTGGTGGATGAATTTGAGTGTGAAATATTGCAAAATAAAGTGGTCAATGCTCATGTTAACTCCATAACCAAGGTAGGTCGCTTCTTCTCAACCTTTAATCCGTTTGTTCTTGGCCTTAGGATGGCTAAACAAACTAAAGAACTGAAGGAGAGATTATATCATTGTAAGATTCAAATCTATAGTTTTGATCTTCAAATTAATACAGTTGTTGATAGAAGTGTTGTGGATGAGTATTGTTACTACGAAATGATGAGAAGCCTTAAAAGCTCAGATTGCACTATTCCAGATGTGATAATAGGAAGGGAAGAAGATAAAGAAACAGTCATAAGACTTTTGATGCATCAAAATCCCTGTGGTGATGATCCTCAAAGTCTCACAGTTATCCCTATTGTGGGTATGGAAGGGTTGGGTAAGACTGCACTTGCACACTCTGTGTTCAATGATCAGAGGATAGATCAATCATTCTCATGCAAAATATGGGTGTCTGTTACTGATGGCTTTAACATTAAACAAGTTATTGCTCAAATAATTCAGTGCATTACAGGTACACTAGTAGAAGTGGAGGAGCAACAGATAAATCAACTTAGAGATATACTTCCAAAACAGAAATTCCTACTTGTCTTGGACGATGTACGGAATGATGATCCTCTCAAATGGAATGAGTTCTGGAATTTAATATCAACATGTATACAAGGAAGTAAAATCTTAGTGACTACACGTAATCATTTTATTGCTTCCATGATGGGCACCATTCACTCTCACACTTTAAAGGGCCTTTGTGTGGAAGATTCATTGTCTCTATTTGAAAAATATGCATTTAAAGAAGGAGAAGAGAAAAAGTTTCCGGATTTGATAAAGGTTGGGAGAGAAATCTTGAACAAATGTGAAGGGGTTCCTTTGTCCATAAGATCAATGGGGAGTATGCTATTTTCAAAATATGAGATAAAGCATTGGGAATTAATTAGAGATATGGAGTTTTGGGATTTGCCAATAGCTAATCCCATTTTACGTGCACTTAGATTAAGCTATCTTCAAATGCCATCTCATTTGAAGCAATGTTTTGAATTATTCTCCCTTTATCCAGATGATTTTGTATTTCACAGTTCTGAAGTAGCTTCGCTTTGGGCAGCACTAGGTCTCCTTCCATCACCAAACAAAGATGAAACTTTGATAGATGTTGCAAATCAATGTCTGCTCGAACTAATGTCGAGATCTTTTCTTCATGAATTTGTCAACTTTGGCACTTCATATTATTTTCAAGTACATGATTTGATGAATGATCTTGCTCGGTCTATTGCAAAAGATGAGTGCCACATGGTAAGTTCCAACATCCAAAATGTACCTGAGAATGTTCAACATCTATCTTTTGTTGAAGATGAGTTCCTTGGTAAATCTTTCACCTCAAAGTCTCTTATGGTAAGAACCATACTATTTCCTATTGAAGGAGTGGGAGCAAGCAACAAAGCTTTCTTGAATATGTGTGTGTCAAGATATAGGTACTTGCGGATTTTAGACTTAAGTGATTCCACATACGAGACTTTGCCCTTGTCCATTGGTAAGTTGAGACATTTAAGGTTTCTCAGCCTTGAGCGGAATGAAAAAATTAAGAGAGTCCCTAATTCTATTTGCAACCTCTACAATTTGCAAGTCTTGAACCTTGTCGGGTGCACAAACCTTGAAAAATTGCCCAAAGGATTAGGAAACTTGATCAGTCTCCGACAATTAGGGATAACCACAAAGGAATCTACTTTACCCGAGAATGACATTGCAAACTTGAATTCTCTTGAAATTCTAAACATTGAGTCTTGTGAGAATCTAAAGTCTCTTTTTGTAGGGATAAAACTTCCCACTCTTAGAACATTGATAGTTACTAAATGTAGGAGTCTAAAGTCATTGCCTCTTGATATTAACCATTTCCCTCAATTGGAGACTTTGTTAGTTGATAACTGTGAGTATTTGGATTTGACAATGGGATATGATGACTGTGAGTATTTGGATTTGACAATGGGATATGATGATCAAAACTCCAACTTGAGGTTAAAAGCAATTTGCCTTCATTCTTTGCCACAACTATGGACCTTGCCTACTTGGTTACAAGAATCCACAATCACATTGCAATCTTTGATAATTGTTGATTGTAAGAACTTTTTGGTGCTTCCTGAATGGCTATCAACTTTGAGTTTTCTGGGATCATTTGGTATGATAAATTGTCCAAAGTTGATGTTTCTCCCGAATGATATCCATTACCTTACCGCCCTTAGATATTTAAGAATTGAAGGTTGTCCAGAATTATGTAGAAAATGCCAACCAAAATTTGGAGAGTATTGGTCCAAAATATCTCACATCTATCAGATTTTCATTGATGAACCAGAGGATATAAAGGAAGATCATTTGGAGGAAGAGGAGTAA 2643 0.3681 MAEPSLSRIANSLITKIASSAIQAASVEIGVYDELQAFKASLLSIKFGILEAELKQGQNPELQDWMMKLKPVLYEAENVVDEFECEILQNKVVNAHVNSITKVGRFFSTFNPFVLGLRMAKQTKELKERLYHCKIQIYSFDLQINTVVDRSVVDEYCYYEMMRSLKSSDCTIPDVIIGREEDKETVIRLLMHQNPCGDDPQSLTVIPIVGMEGLGKTALAHSVFNDQRIDQSFSCKIWVSVTDGFNIKQVIAQIIQCITGTLVEVEEQQINQLRDILPKQKFLLVLDDVRNDDPLKWNEFWNLISTCIQGSKILVTTRNHFIASMMGTIHSHTLKGLCVEDSLSLFEKYAFKEGEEKKFPDLIKVGREILNKCEGVPLSIRSMGSMLFSKYEIKHWELIRDMEFWDLPIANPILRALRLSYLQMPSHLKQCFELFSLYPDDFVFHSSEVASLWAALGLLPSPNKDETLIDVANQCLLELMSRSFLHEFVNFGTSYYFQVHDLMNDLARSIAKDECHMVSSNIQNVPENVQHLSFVEDEFLGKSFTSKSLMVRTILFPIEGVGASNKAFLNMCVSRYRYLRILDLSDSTYETLPLSIGKLRHLRFLSLERNEKIKRVPNSICNLYNLQVLNLVGCTNLEKLPKGLGNLISLRQLGITTKESTLPENDIANLNSLEILNIESCENLKSLFVGIKLPTLRTLIVTKCRSLKSLPLDINHFPQLETLLVDNCEYLDLTMGYDDCEYLDLTMGYDDQNSNLRLKAICLHSLPQLWTLPTWLQESTITLQSLIIVDCKNFLVLPEWLSTLSFLGSFGMINCPKLMFLPNDIHYLTALRYLRIEGCPELCRKCQPKFGEYWSKISHIYQIFIDEPEDIKEDHLEEEE* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0280 880 Gene3D Ribonuclease Inhibitor 744 853 IPR032675 -
Lan19g0280 880 PRINTS Disease resistance protein signature 205 220 - -
Lan19g0280 880 PRINTS Disease resistance protein signature 276 290 - -
Lan19g0280 880 PRINTS Disease resistance protein signature 373 387 - -
Lan19g0280 880 PRINTS Disease resistance protein signature 668 684 - -
Lan19g0280 880 SUPERFAMILY L domain-like 498 866 - -
Lan19g0280 880 Gene3D Ribonuclease Inhibitor 507 658 IPR032675 -
Lan19g0280 880 Pfam Rx N-terminal domain 11 96 IPR041118 -
Lan19g0280 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 433 IPR027417 -
Lan19g0280 880 Gene3D - 10 123 - -
Lan19g0280 880 CDD RX-CC_like 11 83 IPR038005 -
Lan19g0280 880 Gene3D - 337 419 IPR042197 -
Lan19g0280 880 PANTHER DISEASE RESISTANCE PROTEIN RP 9 792 IPR044974 GO:0006952
Lan19g0280 880 Gene3D Ribonuclease Inhibitor 659 743 IPR032675 -
Lan19g0280 880 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 9 792 - -
Lan19g0280 880 Gene3D - 420 506 IPR036388 -
Lan19g0280 880 Gene3D - 160 331 IPR027417 -
Lan19g0280 880 Pfam NB-ARC domain 180 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0280 Lan-Chr19 3055214 3058078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0280 200 842 WRKY Transcription Factor Family AT5G45050 22.995 5.45e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0280 - - lang:109334707 1171.38