Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0274 ATGTTAGCTCAAAAAATGGAGTTGAAGGGTGATATAGTGGAGAATAATAATAATAAGAAGGGAATATGTCTTATTTGGGAAGATATAAGAGTGGTAGCACCCAATAATTTGAAGGTGTTAAATGGGTTAAGTGGTTATGCAGAACCTAACAGGATTATGGCTCTCATGGGTCCTTCAGGATCTGGCAAATCTACCTTACTTGATGCCATGGCTGGAATAGTTTCCACCAATGTTAGCATGAGTGGAAATGTATTACTCAATGGGACCAAGAGAAGTACATGCTGCAGAGATATTTCATATGTTACTCAAGAAGATTATTTCTTGGGCACTTTAACAGTGAGGGAAACCCTGACATATGCTGCACATTTGAGGCTTCCTTGTAACATGACAAAAGATGAGATCAATAAGGTGGTAACCAAGATATTGGATGAAATGGGTTTGCAAGATTGTGCAGATTGCAGACTTGGAAATTGGCATTTGAGAGGGATAAGTAATGGGGAGAAGAGAAGGCTTAGCATAAGCATTGAAATCATAACTCAACCTCATATATTACTTCTTGATGAACCCACTAGTGGGCTTGATAGTGCAGCTTCTTTTTATGTCATGTCATCACTGAGAAGCATAGCACATAATGGAAGAATAGTTATCTGCTCTATTCATCAGCCTTGTAGTGAAGTGTTCAATCTTTTTGATGATCTATTACTCCTTGCAGCAGGCGAAACTGTGTTTTTTGGAGAAAGAACTATGGCTGTAAAGTTCTTCGCAGATGCCGGGTTTCCTTGTCCAACAAGAAAAAATCCCCCGGAGCATTTCCTTCGTTGTGTTAGCGCAGAGTTCGATAGTGTTGCAACCTTAATACAGTCCAGAAATATCAAAGTAGCTTCACCATCTTGGAATTCCTCAATGAATAAGACAACCAAGGAGATTAAATCTGAACTTATAAAGAACTACAAGAACTCCATGCATTCAGCAAAGGCAAGGGAAAAAATCAGTGAAATCAAGCTAAGAGAAGTACCTTTGATTGGGAGAACATATGATACCAGCATGCTGAAGCAACTATGCACGTTGACACAAAGATCATTCCTGAATATGTGCAGAGACATTGGTTACTACTGGTTAAGGATTGTATTCTACATCTTGGTATCAGGGTGTGCTGGTTTTCTTTACTTCAACATAGGAACAGGTTCTGGAGCAATCTTGTCAAGAGGCAAGTGTGATGGATTCATCTATGGCTTTATGGCCTTCCTCTGTTTAGGTGGCTTACCCTTCTTCCTTGAGGAATTAAAGGTCTTCAGACGTGAAAGGTTTGGGAGGCATTACGGCGAGGGTGTCTATGTACTATCAAGTTTCCTGTCATCATTCCCATTTGTTGTTGCAATTTCCCTCTCTTCAGGGACAATACTTTACCTCATGATGAACTTTCATCCAGGCTTCTCTCATTACTTTTACTTTTGCATAAACCTACTTTGCTGCATTTCTGTCACAGAAAGCTGCATACTACTTGTAGCAGCACTTGTGTCCAACTTATTGCTAGCCATAGGAACTGCTACTGGTATAATTGTATTCATGATGATGCCAACTATCATATTCAGAAGGCTCACAGACCTTCCAAAATTCTTCTGGCGCTACCCAATGTCCTACATTAGCTACACTGCATGGTCAACACAGGGTCAGTTCAAGAATGACTTAATTGGACTTGAATTTGAACCACTGGTGGCAGGGGATGCTAAGATAAAGGGTGAAGTGATACTTCAGGATACATATGGAATTTCAACTGATTATTCAAAATGGTGGGACTTAGGAGCTCTAGTTTGCTTAATAATATCATATAGACTGCTATTTTTCTTGGTTCTTAAGCACAAGGAGAGAGTCAAATCTCTCTTACACACCAAAAAGACTGTCCTAGACATTTTACTCAGAAGACCCTCATTAAAGGACAAATATATTTCTTCCAAGAGGCACCAATCCCTGCATCCTTTATCAGATCAAGAGGGTTTTGGTTCTCCAATGGCTTAG 2016 0.3978 MLAQKMELKGDIVENNNNKKGICLIWEDIRVVAPNNLKVLNGLSGYAEPNRIMALMGPSGSGKSTLLDAMAGIVSTNVSMSGNVLLNGTKRSTCCRDISYVTQEDYFLGTLTVRETLTYAAHLRLPCNMTKDEINKVVTKILDEMGLQDCADCRLGNWHLRGISNGEKRRLSISIEIITQPHILLLDEPTSGLDSAASFYVMSSLRSIAHNGRIVICSIHQPCSEVFNLFDDLLLLAAGETVFFGERTMAVKFFADAGFPCPTRKNPPEHFLRCVSAEFDSVATLIQSRNIKVASPSWNSSMNKTTKEIKSELIKNYKNSMHSAKAREKISEIKLREVPLIGRTYDTSMLKQLCTLTQRSFLNMCRDIGYYWLRIVFYILVSGCAGFLYFNIGTGSGAILSRGKCDGFIYGFMAFLCLGGLPFFLEELKVFRRERFGRHYGEGVYVLSSFLSSFPFVVAISLSSGTILYLMMNFHPGFSHYFYFCINLLCCISVTESCILLVAALVSNLLLAIGTATGIIVFMMMPTIIFRRLTDLPKFFWRYPMSYISYTAWSTQGQFKNDLIGLEFEPLVAGDAKIKGEVILQDTYGISTDYSKWWDLGALVCLIISYRLLFFLVLKHKERVKSLLHTKKTVLDILLRRPSLKDKYISSKRHQSLHPLSDQEGFGSPMA* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0274 671 Pfam ABC-2 type transporter 352 557 IPR013525 GO:0016020|GO:0140359
Lan19g0274 671 SMART AAA_5 49 248 IPR003593 -
Lan19g0274 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 263 IPR003439 GO:0005524
Lan19g0274 671 Pfam ABC-2 type transporter 220 324 IPR043926 GO:0140359
Lan19g0274 671 MobiDBLite consensus disorder prediction 651 671 - -
Lan19g0274 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 248 IPR027417 -
Lan19g0274 671 Gene3D - 12 256 IPR027417 -
Lan19g0274 671 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 23 628 - -
Lan19g0274 671 Pfam ABC transporter 40 191 IPR003439 GO:0005524
Lan19g0274 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0274 Lan-Chr19 2979098 2984534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0274 36 221 Calmodulin-binding Proteins AT2G36910 26.425 3.44e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0274 K05681 - aip:107646291 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g1000 5 23305042 23310308 Lan19g0274 19 2979098 2984534 LSH