Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0271 ATGGCTTCTTCTTCTTCCGATCCCGGTAAGTCCGAAATTGGTGGCGGTGCGGCGGAGACTTCGGAAGCTGCGGCGGTGGCGGTGGCGGTGGCGAACGATCAATCGTTATTGTACAGGGGATTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCGAAAGAACGCATCAGCAAAATGCCTCCTTGTGCCGCTGGAAAACGCAGCTCCATATACCGTGGAGTTACCAGGCATAGATGGACTGGTCGCTATGAGGCACATCTTTGGGATAAAAGTACATGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAGGAAGCAGCAGCTAGAGCATATGACCTTGCTGCTCTGAAGTATTGGGGTCCAGGGACTCTCATTAATTTCCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATGTTTCGAGAGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGAATATCAAAATATCGTGCACTCTCCAGTCGATGGGAGCCATCATATAGTCGTTTTGCTGGATCTGACTACTTCAACAGTATGCATTATGGCGCAGGTGATGATTCAGCCGCAGAAAGTGAGTATGCAAGTGGTTTCTGTATAGAAAGAAAGATTGATTTAACTGGTCACATTAAATGGTGGGGATCTAATAAAAGTCGTCAACCTGATGCTGGAACGAGATTATCAGAAGAAAAGAGACATGGTTTCGCTGGAGATATTTGCAGCGAACTTAAAACGCTGGAACAGAAAGTCCAACCTACTGAACCATACCAGATGCCAGAGTTAGGCAGGTCCCACAATGAGAAAAAACATAGAAGTTCTGCCGTCTCTGCCTTAAGTATCTTGTCGCAATCTGCTGCTTATAAGAGCTTGCAAGAGAAAGCATCAAAGAAACAGGAAAATAGCATCGATAATGATGAGAATGAAAACAAAAATACAGTCAATAAGTTGGATTATGGCAAAGCAGTTGAGAAATCATCAAATCATGACAGTGACAGTGATCGACTTGACATTGCAATGGGAACAAGTGGGGCATTGTGTCTTCAAAGAAATGTTTATCCATCGACCCCGTTCTTGTCTGCACCGCTTTTGACTGCATACGATACTGTTGATCCATCATTGGTAGATCCTGTTTTGTGGACGTCTCTTGTGCCTATGCTTTCTGCTAGCCTTTCTCGTCCCACTGAGGTTACAAAGACTGAGACCAGTTCATCATACACTATCTTTCAGCCAGAGGAGTGA 1287 0.4437 MASSSSDPGKSEIGGGAAETSEAAAVAVAVANDQSLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRALSSRWEPSYSRFAGSDYFNSMHYGAGDDSAAESEYASGFCIERKIDLTGHIKWWGSNKSRQPDAGTRLSEEKRHGFAGDICSELKTLEQKVQPTEPYQMPELGRSHNEKKHRSSAVSALSILSQSAAYKSLQEKASKKQENSIDNDENENKNTVNKLDYGKAVEKSSNHDSDSDRLDIAMGTSGALCLQRNVYPSTPFLSAPLLTAYDTVDPSLVDPVLWTSLVPMLSASLSRPTEVTKTETSSSYTIFQPEE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0271 428 MobiDBLite consensus disorder prediction 307 350 - -
Lan19g0271 428 ProSiteProfiles AP2/ERF domain profile. 70 136 IPR001471 GO:0003700|GO:0006355
Lan19g0271 428 Gene3D AP2/ERF domain 70 138 IPR036955 GO:0003700|GO:0006355
Lan19g0271 428 SUPERFAMILY DNA-binding domain 69 137 IPR016177 GO:0003677
Lan19g0271 428 Coils Coil 311 331 - -
Lan19g0271 428 PANTHER BNAA03G19580D PROTEIN 2 422 - -
Lan19g0271 428 Pfam AP2 domain 70 128 IPR001471 GO:0003700|GO:0006355
Lan19g0271 428 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 422 - -
Lan19g0271 428 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Lan19g0271 428 PRINTS Ethylene responsive element binding protein signature 118 138 IPR001471 GO:0003700|GO:0006355
Lan19g0271 428 SMART rav1_2 70 142 IPR001471 GO:0003700|GO:0006355
Lan19g0271 428 MobiDBLite consensus disorder prediction 264 291 - -
Lan19g0271 428 MobiDBLite consensus disorder prediction 308 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0271 Lan-Chr19 2956365 2960835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0271 1 424 AP2-EREBP Transcription Factor Family AT2G41710 61.136 1.39e-162 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan19g0271 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0271 K09285 - gmx:100786651 715.687