Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0259 ATGGCAATTTGGAAGTGCTTATTTGGATGGAAGAAAAAGCTATTATTCACTTCTGAATCAAAGGAAAAAAATCCAAAGAAATGGAGATGTAGTGATGGAAAGTCTAAGTTGAAAAATTATCCTACAATTACTGCAACAGATAGGACATTAATAGAAGCAAAATCTGAGCAGAGAAAACATGCTTTGACTGTGGCTATTGCAACAGCATCTGCTGCAGAAGCTGCAGTTGCAGCTGCTAATGCTGCTGCTGAGGTTGTCCGGTTAACAACTGCTTCTTGTTCTTATTCATATCAATCCAATGGAGACAGGAACATGGCTGCAATCAAGATTCAAACCGAGTTCCGGGCACATCTTGCTAGAAAAGCATTAAGAGCACTGAAAGGTGTTGTAAGACTGCAAGCTATAGTTCGCGGCCAAGCTGCGAGGCGCGAATTGTCCAGCACTTCGAAGAAATTGCTCTCCAATGCAAGGAAGCAGGTAGAAGTTCAAGAAAGATGCAATTATAGTGATGAAGAAAGGTGCAAACATGACAAGTTCAAGCAGTTTGCAAATCGAAAGAAGAGTTCGGAAGAAAAGGAAATGAAGTTACAGAATGAACTTTGTAGTCAAAGAAAATGGAATTGCAGCTTGCACTCAGGAGAAGGTGTTGAAGACACATGGTTAAGAAAGCAAGAGGCCATTGTCAAAAGAGAACGCATGAATCAGTACTCTTGTTCACATAAGGAGATAACAATTCCTGAAATGGTGGAAGTATCTGGAAGAGAGAGCAGCCATATTCTAAATGTAGGACAATTTGTGCATAAAGAGAGAGCATCTCTTTCTTCAAAGGGATGGTATAATACAACAAAAGTTGCACATAGGAACCTGAAAAAACAAGATTTACAAGAAGGACTAAGTTCACAAATTTCAACCCAAAGGAAATCATTTTCTCATGGAAAGAAAAAATGTGTAGTAGATGATAATTTCATGGCAAATTCTCAAGTTTTTCCTAGTTACATGGCTGTGACAGAATCCACTAAAGCAAAGATAAGGTCATTGAGTTCACCAAGGCAAAGAAAAAGATATTTTGATGAATGTTCCAATCACAGTGTCCCTCAGAATAAGGGAATACCCTTCTGA 1119 0.3878 MAIWKCLFGWKKKLLFTSESKEKNPKKWRCSDGKSKLKNYPTITATDRTLIEAKSEQRKHALTVAIATASAAEAAVAAANAAAEVVRLTTASCSYSYQSNGDRNMAAIKIQTEFRAHLARKALRALKGVVRLQAIVRGQAARRELSSTSKKLLSNARKQVEVQERCNYSDEERCKHDKFKQFANRKKSSEEKEMKLQNELCSQRKWNCSLHSGEGVEDTWLRKQEAIVKRERMNQYSCSHKEITIPEMVEVSGRESSHILNVGQFVHKERASLSSKGWYNTTKVAHRNLKKQDLQEGLSSQISTQRKSFSHGKKKCVVDDNFMANSQVFPSYMAVTESTKAKIRSLSSPRQRKRYFDECSNHSVPQNKGIPF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0259 372 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Lan19g0259 372 Pfam IQ calmodulin-binding motif 105 124 IPR000048 GO:0005515
Lan19g0259 372 PANTHER IQ-DOMAIN 12 1 368 - -
Lan19g0259 372 Pfam Protein of unknown function (DUF4005) 327 354 IPR025064 -
Lan19g0259 372 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Lan19g0259 372 SMART iq_5 125 146 IPR000048 GO:0005515
Lan19g0259 372 SMART iq_5 102 124 IPR000048 GO:0005515
Lan19g0259 372 Coils Coil 179 199 - -
Lan19g0259 372 Gene3D - 102 152 - -
Lan19g0259 372 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0259 Lan-Chr19 2872841 2875124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0259 1 357 IQD Protein Family AT5G03960 41.645 3.02e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0259 - - cam:101513369 320.472