Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0239 ATGAAGAGTGAGTTTCTGAGAGGGTGTCTTAACAAGTGGAAGAAAACGGGGAATCAAATCATACCTTATGCTGCCTGTGAGTACTGCTGTCAATGGGTAATGTGGTCTTCCATGCATGAAAGTTGCTCCCTCCCAAATGATGTACCAAAGGGTCACTTGGTTGTCTATGTAGGAGAGAAACACACAAGATTTGTCATCAAGATTGCAGTACTCAATCATCCACTATTCAAGGCCTTGCTGGATCAAGCTCAGGAAGAATATGACTTCACTGCAGCAGACTCAAAGCTTCGTATTCCTTGTGATGAGCATCTTTTCCTCAGTGTCCTTCGCCGTGCAACCTCAGCACAGAATGAGAGGGTGTTTTTGTGTCACTGA 375 0.4453 MKSEFLRGCLNKWKKTGNQIIPYAACEYCCQWVMWSSMHESCSLPNDVPKGHLVVYVGEKHTRFVIKIAVLNHPLFKALLDQAQEEYDFTAADSKLRIPCDEHLFLSVLRRATSAQNERVFLCH* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0239 124 Pfam Auxin responsive protein 41 110 IPR003676 GO:0009733
Lan19g0239 124 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 123 - -
Lan19g0239 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0239 Lan-Chr19 2507674 2508190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0239 31 109 Calmodulin-binding Proteins AT4G34750 45.000 1.89e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0239 K14488 - vvi:100253355 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0420 9 6093288 6094318 Lan19g0239 19 2507674 2508190 LSH