Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0236 ATGGATTTGAATTATGGAATATTAATATTGAGGAACAATGCTACAACCTCGTGTGTTTATCTTGTTTTATTATTATTGTTACATGTTTTTGCTTTGTTAAGTCTTGTACCACGTGTTCAATGTGCGGAAGATGGTGATTCTTTAGTGCCAGCATTTTACTCTGAAGAAATATATAAGGAGCTTGAAGGTCTCACTGCAACCTTAACAAGGGACATCAAAGCAGAATTAAGCTTCTGCATAAAGGATGCGAAGCAAGATTGGGAAGAGGCGTTTAACTTTAAGAGGAGGTTGCAATTCGTGGATAATTGTGTTAAGCAAAAAGGAGATTTCAGAGATAGAATATGTACTTCTGCTGAAATAAGATACTACTTCCGAAGTTTGTTCGAGCAAGGAGCTTCAGCATCAGGTTATGTAAAACCAAACAAGAATTGCAATTTGACTTCATGGGTTGATGGTTGTGAACCTGGTTGGAGTTGTAGTGCTGCTCAGAATGTTGATCTCAAAAAAGATACAAAGGACATTCCTGGTAGAATTAAGAACTGCCAACCTTGTTGTGAAGGGTTTTTCTGTCCTCAAGGGTTGACTTGCATGATAACTTGTCCACTTGGTTCTTATTGTCCACTTGCAAAACTGAACAAAACAACTGGAGTATGTGATCCATATAGTTACCAGATACCTCCAGGAGAAACAAATCATACTTGTGGTAGTGCTGATATTTGGTCTGGTGTTATGAACAATAGTGATATCTTCTGTTCTCCTGGATCATATTGCCCAACTGCAATAGAAAAAAAATCTTGTGATAGTGGATTTTACTGCAGAACTGGCTCGACTCATCCAAATCCATGCTCCAGGTTGAGTACCTGTAACCCAAATACAACAACCCAAAATATGCATGCTTATGGTGCTCTGTTTATTATTGCTTTGAGTACCCTCCTGGTGTTCATTTATAACTGCTCTGATCAAGTTCTAGCTACTAGAGAAAGAAGGCAAGCTAAATCCAGAGAAGCTGCAGCAAGACATGCAAGAGAAACTGCACAAGCTCGCGAAAGGTGGAAAATAGCAAGAGATGTTGCTAAGAAGAAAACATTGGATTCATTGTCACGCACCTTTTCGCGTAAAAAATCTACAAAGCAAGGAGAGCCAGCAAAGGGTTTCGGTAAAGCAGGTGGTGCTCTTTTTCCACCAACGCCTCCGGATGCTGCAAGCACACCTGAGCCTTCAGGTTCAAAAGGCAAAAAAAAGGAACCTAGCAACCTTTCTAAAATGATGAACTCATTTGAGAATGATCCGAATAGCCAAGAAGGATTTGATCTTCAGATTGGAGATAAGAACATTAAAAAGAATATGCCAAAGGGAAAACAGTTGCATACACATAGCCAAATTCTAAGGTATGCTTATGGTCAGATTGAAAAGGAGAAAGCTCAACAAGAGAATAATAAGAACTTGACTTTCTCCGGAGTGATTTCAATGGCTACTGAAGGTGAGGTTAGGACAAGGCCTGTGATTGAGATAGCTTGCAAAGATCTAACTCTCACTTTGAAAGGGAAAAACAAACAAATACTGAAATGTGTGAATGGTAAAATCATGCCTGGTAGAGTTTCAGCTGTGATGGGACCTTCCGGAGCAGGAAAGACAACATTTCTTTCAGCTATTGCAGGAAAAGCAAGAGGGTGCACTATGACAGGCCAAATTCTAATTAATGGAAAACAAGAGTCCATTCACTCATTTAAGAAAATTACTGGTTTTGTTCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGGTTCAGTGCAAGATGCAGACTACCAGCAGACATGCCGAAACCAGACAAGGTTCTAATAGTTGAAAGAGTAATTGAGTCTTTGGGTCTCCAGCATATAAGGGATTCTCTAGTAGGAACTGTAGAGAAGAGAGGCATATCTGGAGGGCAAAGAAAACGTGTAAATGTAGGACTAGAAATGGTGATGGAGCCTTCTTTATTAATCTTAGATGAGCCTACAACTGGTTTGGATAGTGCATCTTCTAGTTTACTGCTTAGAGCACTCAGACGTGAAGCTCTCGAAGGAGTTAACATTTGCATGGTGCTTCACCAACCTAGCTATACTTTGTTCAGAATGTTTGATGATATAGTATTTCTAGCCAAAGGTGGTCTTACTGCATATCATGGTCCTGTTAAAAAAGTGGAAGAATACTTTGCAGGTATCGGAATCCCCGTGCCGGACCGTGTGAATCCACCAGACCATTTCATTGACATTCTTGAAGGCTTAGAGAAACCAGGTTCAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCATAATGGATATTCAGTACCACATGACATGCTTCATTTCATTGATCAGATTGCTGCATCTTCATCTGGTTCACAGGTGCCTGAAGCAACAAAGGCTAACGATGAACCTGTTGATCAATCCTTTATTACAGAGTTTTGGGCTGATTTGAAGAGCAATGTTCAGATCCAAAGAGATCACATAGAAGCAATCTTCTTAACAACAAAAGACTTATCTAACAGAATAACTCCTGGTGTTGGCAGACAATATAGATACTTTGTTGGACGGGTTGGCAAGCAGCAACTGCGAGAAGCAAAATTAATAGCAGTGGACTATCTTCTTTTATTAGTTGCGGGTGCTATCTTAGGAACTCTTACTAAAGTGAATGATGAAACATTTGGGTCCCTTGGCTATACATATACTGTCATAGCTGTCTCACTGCTTTGCAAGATTGCAGCTCTCAGATCATTTTCTTTGGATAAGTTACATTACTGGAGAGAAAGTGCAGCTGGGATAAGCAGCTTGGCTCATTTTCTAGCCAAAGATACGATCGATCTTTTCAATACTATAGTCAAACCTTTGGTTTATCTCTCCATGTTCTACTTTTTTAGCAATCCAAGATCAAGCTTTGGCAGTAACTACGCAGTTTTGCTTTGTCTAGTGTACTGTGTGACTGGCATGGCTTATGCATTAGCCATTTACTTTGAGCCTGCTCCTGCACAATTGTGGTCAGTGCTTGTTCCTGTTGTTATGACTCTGGTTGCAAGTCAGAACAGAGATACTCCATTCATGAAGATCCTAGTAAAATTGTGCTATCCAAAATGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTACACTGGTGTATGGCTAATAACTCGTTGCGGTTCATTGATGAGCACTGGCTATGATGTTAGCGATTGGCCTATTTGTTTGATTGTCCTCATTTTATACGGTATACTTGCTAGAGTTGTAGCATTCTTTTGTCTGGTGATTTCTCAAAAGAAGTGA 3330 0.4 MDLNYGILILRNNATTSCVYLVLLLLLHVFALLSLVPRVQCAEDGDSLVPAFYSEEIYKELEGLTATLTRDIKAELSFCIKDAKQDWEEAFNFKRRLQFVDNCVKQKGDFRDRICTSAEIRYYFRSLFEQGASASGYVKPNKNCNLTSWVDGCEPGWSCSAAQNVDLKKDTKDIPGRIKNCQPCCEGFFCPQGLTCMITCPLGSYCPLAKLNKTTGVCDPYSYQIPPGETNHTCGSADIWSGVMNNSDIFCSPGSYCPTAIEKKSCDSGFYCRTGSTHPNPCSRLSTCNPNTTTQNMHAYGALFIIALSTLLVFIYNCSDQVLATRERRQAKSREAAARHARETAQARERWKIARDVAKKKTLDSLSRTFSRKKSTKQGEPAKGFGKAGGALFPPTPPDAASTPEPSGSKGKKKEPSNLSKMMNSFENDPNSQEGFDLQIGDKNIKKNMPKGKQLHTHSQILRYAYGQIEKEKAQQENNKNLTFSGVISMATEGEVRTRPVIEIACKDLTLTLKGKNKQILKCVNGKIMPGRVSAVMGPSGAGKTTFLSAIAGKARGCTMTGQILINGKQESIHSFKKITGFVPQDDIVHGNLTVEENLRFSARCRLPADMPKPDKVLIVERVIESLGLQHIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLRALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLEKPGSGVTHEQLPVRWMLHNGYSVPHDMLHFIDQIAASSSGSQVPEATKANDEPVDQSFITEFWADLKSNVQIQRDHIEAIFLTTKDLSNRITPGVGRQYRYFVGRVGKQQLREAKLIAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESAAGISSLAHFLAKDTIDLFNTIVKPLVYLSMFYFFSNPRSSFGSNYAVLLCLVYCVTGMAYALAIYFEPAPAQLWSVLVPVVMTLVASQNRDTPFMKILVKLCYPKWALEAFIIANAERYTGVWLITRCGSLMSTGYDVSDWPICLIVLILYGILARVVAFFCLVISQKK* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0236 1109 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 46 1105 - -
Lan19g0236 1109 MobiDBLite consensus disorder prediction 418 434 - -
Lan19g0236 1109 MobiDBLite consensus disorder prediction 334 353 - -
Lan19g0236 1109 SMART AAA_5 530 722 IPR003593 -
Lan19g0236 1109 Pfam ABC transporter 521 672 IPR003439 GO:0005524
Lan19g0236 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 727 IPR027417 -
Lan19g0236 1109 ProSitePatterns ABC transporters family signature. 645 659 IPR017871 GO:0005524
Lan19g0236 1109 Gene3D - 494 739 IPR027417 -
Lan19g0236 1109 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 745 IPR003439 GO:0005524
Lan19g0236 1109 MobiDBLite consensus disorder prediction 365 380 - -
Lan19g0236 1109 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 1105 - -
Lan19g0236 1109 Pfam ABC-2 type transporter 702 1109 IPR043926 GO:0140359
Lan19g0236 1109 MobiDBLite consensus disorder prediction 365 434 - -
Lan19g0236 1109 CDD ABCG_EPDR 502 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0236 Lan-Chr19 2467985 2477898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0236 531 724 Calmodulin-binding Proteins AT2G36910 28.713 2.43e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0236 - - gmx:100780238 1756.5