Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0224 ATGGAGCTATCCATTCTTTGTGGTGTTGAAGTTGTTGTTCTTTTATTTTCTGTTGGTGGCAAGGCTTACTCTTTTGGTCATCCAAGCATTGAGGCTGTGACTAAGAAGTTCCTTCACCAAGGAGAAGGATCACATGTGAGTCATGGTGAGTCCTCAAATGATGATGACAATATTGGTAAGCTTAGCCAACAACTTCAAGAGCTGAAAGACCAGATTCAAGTGGAGAAGGATAAGAAGAAGGACCTTGATAAAGCTCTTAGCAAATACAAGTTTATCAGAGGAAAACTTCCCATTAATAATCTTAGTTTTGAGGAGCTTGTGGAGTTCAAGGCTTCCTGGGTTATGGTCCAAGATAATATGTCAGAATCCAATAATGAGATGGAGGCAGCATCATCTTTACTTCTTCTTCGCGAGAATCGCATGTATGAGACTGGGATTTGA 441 0.4036 MELSILCGVEVVVLLFSVGGKAYSFGHPSIEAVTKKFLHQGEGSHVSHGESSNDDDNIGKLSQQLQELKDQIQVEKDKKKDLDKALSKYKFIRGKLPINNLSFEELVEFKASWVMVQDNMSESNNEMEAASSLLLLRENRMYETGI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0224 146 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL29 2 142 - -
Lan19g0224 146 PANTHER MADS BOX PROTEIN 2 142 - -
Lan19g0224 146 ProSiteProfiles MADS-box domain profile. 1 29 IPR002100 GO:0003677|GO:0046983
Lan19g0224 146 SUPERFAMILY SRF-like 2 41 IPR036879 GO:0003677|GO:0046983
Lan19g0224 146 Coils Coil 58 85 - -
Lan19g0224 146 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 1 25 IPR002100 GO:0003677|GO:0046983
Lan19g0224 146 Gene3D - 1 52 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0224 Lan-Chr19 2197442 2197882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0224 2 136 Type I MADS-box Gene Family AT2G34440 30.147 3.45e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lan19g0224 SRF-TF 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0224 - - lang:109341333 245.743