LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan19g0205	ATGCACACTTCTACAAATCATTATTATTTTCTATTTAAGAAAATTCAGGTTTCAAGTTCATTTGTAGCTCCTGAAAACTTGGAAGTTATGGCAACAACATTAATGGCAGCCACAACAAATTCTAGCATTGTTAAACAAACCCCTTTCTTTGCCCAAAGCAGGGTTACCAACTCCAACCCTCTAAGGAATGTTGTCTCTATGGGAACTAGCAAATACATCATGAGCAATGATTTGTGGTATGGACCAGAAAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACACCATCATATTTGACTGGAGAATTCCCTGGAGATTATGGATGGGACACTGCTGGTTTATCTGCTGACCCTGAAGCATTTGCCAAGAATAGGGCCCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTAGGAAGCATCACACCAGAAGTACTTGAGAAATGGCTCAGAGTGGACTTCAAGGAACCAGTTTGGTTCAAAGCTGGGGCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCACAAAGCATTCTAGCAGTGTTGGGCTTCCAAGTTGTTCTGATGGGCCTTGTTGAAGGCTTTAGAATCAATGGGCTTGATGGGGTTGGAGAGGGTAATAACCTTTACCCTGGGGGTCAGTACTTTGACCCTCTTGGGCTTGCTGATGATCCTGTTACTTTTGCTGAGCTCAAGGTGAAAGAGATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTTACTGGAAAAGGCCCATTAGAGAATCTTTTGGACCACCTTCATAACCCTGTGGCTAATAATGCATGGGTTTATGCCACCAAGTTTGTGCCTGGTTCTTAA	894	0.4407	MHTSTNHYYFLFKKIQVSSSFVAPENLEVMATTLMAATTNSSIVKQTPFFAQSRVTNSNPLRNVVSMGTSKYIMSNDLWYGPERVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGSITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLHNPVANNAWVYATKFVPGS*	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan19g0205	297	Pfam	Chlorophyll A-B binding protein	96	263	IPR022796	-
	Lan19g0205	297	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	38	297	-	-
	Lan19g0205	297	SUPERFAMILY	Chlorophyll a-b binding protein	78	294	-	-
	Lan19g0205	297	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	38	297	IPR001344	GO:0009765\|GO:0016020
	Lan19g0205	297	Gene3D	Chlorophyll a/b binding protein domain	86	290	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan19g0205	Lan-Chr19	2029710	2032094	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan19g0205	13	296	Chloroplast and Mitochondria Gene Families	AT3G27690	61.905	8.73e-121	346

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan19g0205	K08914		-	gmx:100779387	501.516