Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0204 ATGATGTTAACAGCTACCAGGAGCTCTCTAGAAGAGATGCTTGATTCGCTTCGCCGGAGAGATGAAGAAGAGAAGCCTAAGGACTTGCCTCCAGCATTGCCAGCTCGTCCGGCATCAAAAGCCCGGCTTCCTCCGGCGAGAAGGACATTGCCTAATAGCTTTAAGGTTGGTAATGAGAATGGTAAGGGGCACAGAAGGAAAGGTAGTTTCGGGAACAAGAAGATGAAGATGGATGTGGAATCACCATATATTGTCAAATCAGAAGAGAAAATAATGTGTGAAGAATCACCACAAGGTCAAGTTTTAACATCTGCTGATACTACTGCTTCGGTAGCTCCTCCACCAGGAGAATTGGAAGATGACAATGTTGCTTATTTCATCAAAAAGAAACTTAATGTTTGGTGTCGGCAAACAAAAGGGAAGTGGGGACTAGGAAGGATACAGTCAACTTCAGGAGAAGCAGCATCTGTCTCACTCTCAAACGGAAATGTTATGAAAGTGTCCAGATTAGAGATCCTACCAGCTAATCCTGATATACTAGACGGCGTGGATGATCTTATACAGCTCAGTTATTTAAACGAGCCCTCCGTTCTACACAATCTTCAGTTTAGATATTCTCAAGATATGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCTCTCAATCCCTTCAAAGATGTCCACATTTACGGAAATGATTATGTTGCAGCTTATAGGCAGAAACTTTTGGATAGTCCTCATGTTTATGCTATGGCTGACGCAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGAGCTGGTAAGACAGAGACAGCGAAAGTTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATTTTATATTAGAAGCTTTCGGAAACGCAAAAACATCCAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACATTGGGGAAAATTTGTGGGGCTAAAATTCAAACCTTTCTGTTGGAAAAGTCAAGAGTTGTTCAACTGGTCAACGGGGAGAGGTCTTATCACATATTTTATCAACTATGTGCTGGATCTTCACCTGATCTTAAAGAGAGGTTGAATCTTAGAGTGGCCAGCGAATATAAATATCTTAACCATAGTGACTGCATGACAATTGACAGTGTTGATGATGCTAAAAATTTCCACAGGCTGATGAAAGCGTTGGATGTTGTTCGAATGAGCAAAGAGGATCAAGAGCTGGTCTTTAAGATGCTTGCTGCAATATTATGGCTCGGAAATATGTCATTCAATGTTACTGACAATGAAAATCACATTGAAGTAGTGGAGGATGAAGCTGTAACCACTGCTGCCTTGCTGATGGGTTGCAGTTCCGAGGAGTTAATGACAGCGTTGTCCACCCGTAAAATCCAAGCCGGCAAGGATACTATTGCCAAAACATTGACATTGCGGCAGGCCATTGATACAAGAGATGCATTAGCGAAATTTATCTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATTAGTATTCTTGATATCTATGGCTTTGAGTCATTCCAGAAAAACAGCTTTGAACAATTTTGTATAAATTATGCCAATGAGAGGCTTCAACAGCATTTCAACCGGCATCTGTTTAAACTTGAGCAGGAGGACTACGAGTTAGATGGTGTTGATTGGACGAAAGTAGATTTTGATGACAACCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTTTGGGGCTAATCTCTTTGTTGGACGAGGAATCAAATTTTCCCAGGGCCACTGATCTAACACTTGCCAGCAAACTTAAGCAGCACCTGAATGCTAATCCTTGCTTTAAAGCGGAAATGGGAAGGGCTTTCAGTGTTCGTCATTACGCTGGGGAGGTTTTGTATGATACAAACGGCTTTCTAGAAAAGAACAGAGATCCACTTCCTTCTGATTCCATTCAACTGCTGTCCTCATGCACTTGTGAACTGCTGCAGTTGTTTTCCAAAATGATTAACCGGTATCAGAAGCAATCGAACTCTGTCCATGCAGGAGCTCTGGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTTAAGTTGATGCATCAGTTAGAGAGCACGACACCACACTTCATTCGTTGTATAAAGCCGAATACTAAGCAACATCCTGGCATATTTGATGAAGACCTTGTTCTTCAACAGCTCAAGTGTTGTGGAGTTTTGGAAGTTGTTAGGATTTCAAGGGCTGGATATCCTACTCGAGTGACACATCAAGAGTTTGCCAGAAGGTATGGGTTTCTTCTTTCTGAGGTCAACACATCTCAGGACCCATTGAGCGTCTCAGTTTCTGTTTTGCAACAATTTAATATTCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACCGGGCAGATTGGTGCACTGGAGGACAAGAGAAAACAGGTTTTGCACGGAACTGTTGGGATTCAAAAATGCTTCCGTGGCCAAAAGGCTCGCAGTTGTTACCATGAGCTTAAGAATGGAGTAGCAACTATACAATCATTTGTTCGGGGAGAAATTGAGAGAAGGAAATATGGTGTTATGGTGAAGTCATCCATGACTATTTCTTCTGAAAAGATTGAGGAGATTCAGGCAGTCATAGTACTACAATCTGTTGTTCGTGGGTGGCTGGTTCGAAGGCAAATTAGAGGCACAGATAAGTTTAAGATATATCCCGAAAATGCAAGATCTAGGCGTAGGTCACGTACGAAGATGGCCGAAGTAAAGCAGGATATGTCACAGAACCAGCCTTCTGCTTTAGCAGAACTCGAAAAGCGAGTTATCAAGGCTGAAGCAACTGCTGAGCAAAAGGAAGAGGAAAATGCTAAATTGAGGGAACAACTAAAACAATTTGAGGGAAGGTGGATTGAGTATGAGACAAAGATGAAAACAATGGAAGAAATGTGGCAAAAACAGATGGCGTCTTTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGGCTCTAGTCAGCCTGTACGGTATGATGTTGCATCGCCTCTTTGCTATGATTCTGAAGATAATACTTCCATAGGATCCCGAACACCCGGGGCCCGAACACCCGCCCCAAGCACGCCTATGAAGTATTCTAGTAGTTTTTCAGTTGGAGCAGGGAGGGCGGCTAATGGTACTTCCATAGGATCCCTAACACCCGGCCCGAGCACGCCTATGAAGTATTCTAGTAGTCTTTCAGTTGGAGCAGGGAGGGGGGCTAATGGTACTTTGAATTCTTCCGTAAGCACTCTGATGAAGGAATTTGATCACCGCAGACATACATTTGATGATGATGCCAGAACACTGCTTGAGGTTAGATCATCGCAATCTGGTAACACGAATTCCATTGAAGAATATCGGAAACTTAAACATAGGTTTGAGGCATGGAAGAAAGAATACAAGGTTAGATTAAAGGAGACAAAAGTGAGACTTCATAAATTAGGGAACTCGGAAGTTGAAAAAAGTCGGCGGACATGGTGGGGAAAAATAAGTTCAATAGCACTCTAG 3666 0.4239 MMLTATRSSLEEMLDSLRRRDEEEKPKDLPPALPARPASKARLPPARRTLPNSFKVGNENGKGHRRKGSFGNKKMKMDVESPYIVKSEEKIMCEESPQGQVLTSADTTASVAPPPGELEDDNVAYFIKKKLNVWCRQTKGKWGLGRIQSTSGEAASVSLSNGNVMKVSRLEILPANPDILDGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYSKAGPVLIALNPFKDVHIYGNDYVAAYRQKLLDSPHVYAMADAAYNEMIRDEVNQSIIISGESGAGKTETAKVAMQYLAALGGGSCGIENEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKSRVVQLVNGERSYHIFYQLCAGSSPDLKERLNLRVASEYKYLNHSDCMTIDSVDDAKNFHRLMKALDVVRMSKEDQELVFKMLAAILWLGNMSFNVTDNENHIEVVEDEAVTTAALLMGCSSEELMTALSTRKIQAGKDTIAKTLTLRQAIDTRDALAKFIYANLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFDDNQECLDLFEKKPLGLISLLDEESNFPRATDLTLASKLKQHLNANPCFKAEMGRAFSVRHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCTCELLQLFSKMINRYQKQSNSVHAGALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQHPGIFDEDLVLQQLKCCGVLEVVRISRAGYPTRVTHQEFARRYGFLLSEVNTSQDPLSVSVSVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDKRKQVLHGTVGIQKCFRGQKARSCYHELKNGVATIQSFVRGEIERRKYGVMVKSSMTISSEKIEEIQAVIVLQSVVRGWLVRRQIRGTDKFKIYPENARSRRRSRTKMAEVKQDMSQNQPSALAELEKRVIKAEATAEQKEEENAKLREQLKQFEGRWIEYETKMKTMEEMWQKQMASLQMSLAAARKSLASENGSSQPVRYDVASPLCYDSEDNTSIGSRTPGARTPAPSTPMKYSSSFSVGAGRAANGTSIGSLTPGPSTPMKYSSSLSVGAGRGANGTLNSSVSTLMKEFDHRRHTFDDDARTLLEVRSSQSGNTNSIEEYRKLKHRFEAWKKEYKVRLKETKVRLHKLGNSEVEKSRRTWWGKISSIAL* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0204 1221 MobiDBLite consensus disorder prediction 1 72 - -
Lan19g0204 1221 ProSiteProfiles IQ motif profile. 913 940 IPR000048 GO:0005515
Lan19g0204 1221 SMART iq_5 912 934 IPR000048 GO:0005515
Lan19g0204 1221 SMART iq_5 852 874 IPR000048 GO:0005515
Lan19g0204 1221 SMART iq_5 875 897 IPR000048 GO:0005515
Lan19g0204 1221 Gene3D - 856 905 - -
Lan19g0204 1221 Gene3D - 364 420 - -
Lan19g0204 1221 Gene3D Myosin VI head, motor domain, U50 subdomain 421 529 - -
Lan19g0204 1221 Gene3D Kinesin motor domain 180 784 IPR036961 -
Lan19g0204 1221 ProSiteProfiles Myosin motor domain profile. 181 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 Gene3D - 785 852 - -
Lan19g0204 1221 Pfam IQ calmodulin-binding motif 915 934 IPR000048 GO:0005515
Lan19g0204 1221 PRINTS Myosin heavy chain signature 211 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 PRINTS Myosin heavy chain signature 265 290 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 PRINTS Myosin heavy chain signature 308 335 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 Pfam Myosin head (motor domain) 183 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 Coils Coil 971 1005 - -
Lan19g0204 1221 ProSiteProfiles IQ motif profile. 855 882 IPR000048 GO:0005515
Lan19g0204 1221 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 128 177 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 PANTHER MYOSIN-2 ISOFORM X1 115 1217 - -
Lan19g0204 1221 SMART MYSc_2a 175 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan19g0204 1221 MobiDBLite consensus disorder prediction 1099 1122 - -
Lan19g0204 1221 Gene3D - 552 741 - -
Lan19g0204 1221 PANTHER MYOSIN 115 1217 - -
Lan19g0204 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 932 IPR027417 -
Lan19g0204 1221 CDD MYSc_Myo8 195 839 IPR036022 -
Lan19g0204 1221 MobiDBLite consensus disorder prediction 12 30 - -
Lan19g0204 1221 MobiDBLite consensus disorder prediction 1061 1085 - -
Lan19g0204 1221 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0204 Lan-Chr19 2018757 2029420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0204 1 1215 Myosins gene family AT5G54280 60.599 0.0 1514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0204 K10357 - gmx:100819335 1910.58