Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0191 ATGGTTTTTCTGAAAGAACTTTGCTTCTTCTTCATTAACATAGGCTTAGATATAATGGGTGTTGAAGAGAAAGATCTTCTTTCTGAATTGAGTTTGCCACCTGGGTTTAGGTTTTACCCAACTGATGAGGAGCTTCTGGTTCAGTATCTATGCCGCAAAGTTGCCGGTCACTATTTCTCACTGCAAATCATTGCTGAAATTGATTTGTACAAGTATGACCCTTGGGTTCTTCCAAGTAAAGCTATATTTGGTGAGAAAGAATGGTATTTTTTCAGCCCAAGAGACAGGAAATACCCGAATGGTTCTAGACCAAATAGAGTAGCTGGGTCTGGCTATTGGAAAGCCACTGGAACTGATAAAACAATCACCACTGGAGGTAGAAAAGTTGGTATTAAAAAATCCCTAGTTTTCTATGTTGGAAAAGCTCCCAAAGGCACTAAAACAAATTGGATTATGCATGAGTATAGACTCCTTGACTCTTCAAGAAATAATGCCAGTGCCAAGCTAGACGAGTGGGTTCTATGTCGCATATACAAGAAAAACTCGAGCTCAGAGAAAAGCAACACAAACATTTCAACCAACGAATACAGCAACGAATCCTCTTCAAATTCATCTTCCTCCAACATCGACAACATTCTCGAATCGTTACCAGAAATCGACGACAATCGCTTCCTCATGACGCAGCATCAGAATCTCACCGCAGTAGACTGGACCAACCCTGCGGTTATGAACTCAGTGACCGAGTTTGTTAACTCGGGGAACCAAACCATGATGAATTATGGAAATGACCTTTGTGTCCCTACTCTGATGGAGGAAGATGTTCAAAGCAAAATCCAACAAAGGTTTCAGAGTTTCGGTTTTTTTCAACAAGAGGGTTTTAATATGAATGAGTTCAGTAACAATATTGATTCTGATGGGTTTAGGTATCCGGTTCACCCGGTTGGTTTTGGGTTCAGGCAATGA 963 0.4071 MVFLKELCFFFINIGLDIMGVEEKDLLSELSLPPGFRFYPTDEELLVQYLCRKVAGHYFSLQIIAEIDLYKYDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKTITTGGRKVGIKKSLVFYVGKAPKGTKTNWIMHEYRLLDSSRNNASAKLDEWVLCRIYKKNSSSEKSNTNISTNEYSNESSSNSSSSNIDNILESLPEIDDNRFLMTQHQNLTAVDWTNPAVMNSVTEFVNSGNQTMMNYGNDLCVPTLMEEDVQSKIQQRFQSFGFFQQEGFNMNEFSNNIDSDGFRYPVHPVGFGFRQ* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0191 320 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 19 296 - -
Lan19g0191 320 PANTHER NAC TRANSCRIPTION FACTOR 56 19 296 - -
Lan19g0191 320 MobiDBLite consensus disorder prediction 184 209 - -
Lan19g0191 320 Pfam No apical meristem (NAM) protein 33 157 IPR003441 GO:0003677|GO:0006355
Lan19g0191 320 SUPERFAMILY NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
Lan19g0191 320 Gene3D NAC domain 41 186 IPR036093 GO:0003677|GO:0006355
Lan19g0191 320 ProSiteProfiles NAC domain profile. 32 180 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0191 Lan-Chr19 1653121 1655949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0191 19 318 NAC Transcription Factor Family AT3G15500 59.283 3.23e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0191 NAM 3.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0191 - - gmx:100170718 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0191 19 1653121 1655949 Lan5g0942 5 22568031 22579018 LSH