Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0172 ATGGGTGGCATGTGTTGCAAACCATCTGCCATTGAGGATAGTAAGGAGAGCCCGAGGGAGCGTTTATCAAGCAAGGCTGCGTTGGAGTCTCGTGTATCTAGAGGGACTTCATCGAGTAGGGAGGAAGTTTATCAAGTAAAGGATAGATATGATAACAATGATGCGAGAGTTGCATTGATTGACAAGCAAGGGAGTAATTGTGCTATTCAAGTGCAAGTTGATAATTTTGAAAGGAAGCGGGAGAAAATGGAATATGTTATTGCTCAACATCCAAGGATTGGTAGTGTTCCCAAAGCCACGGAAGGGGAGCAGGTTGCAGCTGGATGGCCCTCATGGCTGGCAGCAGTTGCTGGAGAGGCTATCAAGGGATGGTTGCCTCGGCGTGCAGATTCGTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGGGCTCGTGATCTTGAACAAAAAAAGATTGTTGCTCTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGGTTCATGGCAAGGGAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTTGAAGGCCTAGTTACATCGAGGATGTCTTGCAGCTTATACCTTGTTTTTGAGTACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACATAAGTTTACAGAAGCTCAGGTTAAATGTTACATGCAGCAAATTTTACGTGGACTTGATCACTGCCACGCCTGTGGTGTGCTGCACCGTGATATTAAGGGTTCCAATCTTTTGATTGACAACAATGGAATATTGAAGATTGCAGATTTTGGTTTGGCAAGCTTTTATGATCCCAATCAAACTCAGCCGCTAACAAGCCGGGTTGTCACTCTTTGGTATAGGCCGCCCGAGCTTTTACTCGGAGCCACGTACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTCGCTGAACTGTACGCTGGCAAGCCTATAATGCCTGGAAGAACTGAGGTGGAGCAGTTACATAAAATTTTTAAACTATGTGGTTCACCTTCTGAGGATTATTGGAAAAAATCAAAGTTGCCTCATGCAACAATATTTAAGCCTCAGCAGCCCTATAGGCGTTGTGTTGCTGAAACATTCAAGGACTTTCCTGCATCTGCAGTTGAACTGATAGAGACCCTTTTATGCATAGATCCCGCTGATCGTGGAACTGCAGCATTTGCCTTGAAGAGTGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAATATCCTCCCAGCAAAGAATTTGATGCCAAAGTACGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAAGAGCAGGAAGCAAGGGCCAGAGACATGACCTTGAGAGAAGAGGAGCAAGGGAATCACGAGCTGTTCCTGCACCTGATGCCAATGCTGAACTGGTCGTGTCAATGCAGAAGAGACAAGGGCTGAGCAATTGTCAAAGCAGGAGTGAGAAGTTTAACCCTCACCCTGAAGAAGTTGCTTCTGGATTTCCCATCGATCCCCCTAGGCCATCACATGCTGTAGAAGTAAATGTTGACCCTCAAGCACATCAACATAAAAGAGCCTCCCATTCAGGTCCACTGACTCACCGCGCTGCATGGGCTAAAGCTGGGAAGAACCAGGACGACGCTCCAAAGATTTCGATGGGGGGCGACTTATCAACAATGTCAGGCTTAATCGCATCGCGAAGGAGTATGTTGTTTGATGATCGCAGAGAAAGGTCTGGATCATCACAAGCCGAAGCTCCAAAACCAGTAAGCAGGTTCCCTGGATCATTCAAGGAGGCCTCTGAGTCGTTGATGCAACAAGATCAGAAGCATCATGCACATGCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAACAAAGACCCTATTCTTGTTGGTTATGGGTCGAAGGGGCATAAAATTCATTATTCTGGACCATTGCTAGTTCCATCAAGCAACATGGATCAGGTGTTGAAAGACCACGATCGCCAAATTCAGGAAGCAGTTAGAAGATCACGGCTGGACAAGGCCAAAATGAGAAGACTTCAAGCTGAAGGGAATCAGATAACCAATTCATTATTCGTTTCTGGTCGTTGA 2133 0.4557 MGGMCCKPSAIEDSKESPRERLSSKAALESRVSRGTSSSREEVYQVKDRYDNNDARVALIDKQGSNCAIQVQVDNFERKREKMEYVIAQHPRIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGHKFTEAQVKCYMQQILRGLDHCHACGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPNQTQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKSKLPHATIFKPQQPYRRCVAETFKDFPASAVELIETLLCIDPADRGTAAFALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAARAGSKGQRHDLERRGARESRAVPAPDANAELVVSMQKRQGLSNCQSRSEKFNPHPEEVASGFPIDPPRPSHAVEVNVDPQAHQHKRASHSGPLTHRAAWAKAGKNQDDAPKISMGGDLSTMSGLIASRRSMLFDDRRERSGSSQAEAPKPVSRFPGSFKEASESLMQQDQKHHAHAPQKEEGRGSNKDPILVGYGSKGHKIHYSGPLLVPSSNMDQVLKDHDRQIQEAVRRSRLDKAKMRRLQAEGNQITNSLFVSGR* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0172 710 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0172 710 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
Lan19g0172 710 MobiDBLite consensus disorder prediction 435 472 - -
Lan19g0172 710 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Lan19g0172 710 MobiDBLite consensus disorder prediction 12 27 - -
Lan19g0172 710 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Lan19g0172 710 PANTHER CYCLIN-DEPENDENT KINASE 1 692 - -
Lan19g0172 710 MobiDBLite consensus disorder prediction 1 40 - -
Lan19g0172 710 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0172 710 MobiDBLite consensus disorder prediction 587 648 - -
Lan19g0172 710 MobiDBLite consensus disorder prediction 426 474 - -
Lan19g0172 710 PANTHER CELL DIVISION PROTEIN KINASE 1 692 - -
Lan19g0172 710 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0172 710 MobiDBLite consensus disorder prediction 552 572 - -
Lan19g0172 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Lan19g0172 710 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Lan19g0172 710 CDD STKc_CDK9_like 132 416 - -
Lan19g0172 710 MobiDBLite consensus disorder prediction 617 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0172 Lan-Chr19 1520376 1526630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0172 124 475 Core Cell Cycle Gene Families AT5G10270 51.902 4.80e-120 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan19g0172 Pkinase 1.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0172 - - gmx:100792173 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0172 19 1520376 1526630 Lan5g0926 5 22298361 22304715 LSH