Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0166 ATGAAGATTCAGAGACTTATCTACCTCTTGTTGGTTCTGTTTAGTTTCATTTCAAGCTCCCAAGCCTACAAATTCTATGTTGGTGGAAAATATGGCTGGGTTATTAACCATTCTGAGGATTACAATCCATGGGCTGAAAGGAACAGGTTCCAAGTTGGTGATTCACTAATTTTTAAGTATGAGAAGGGATCAAACTCAGTGTTGGAAGTGAACAAGGATGATTATGAAAAATGTTACAAGAAGAACCCAATCAAGAAGTTTGAGGATGGAAACACTGAGTTCCAAATTGATAGATCAGGTCCTTACTTTTTCATTAGTGGCAAAGATGATAATTGTGAAAAGGGTCAGAAACTTATTGTTGTGGTGTTGGCTATAAGACCCCCACCTCCTCAAACTCCTTCTCCTAGTGTTCCATCACCCTATGTTTCAGCACCACCAAAAGCTCCTTATGTTCCAACACCCCCAAAATCTTCATCTCCATCACAAGCTCCTTCTATACCTAAAGCTCCATCACCCTATGTTCCAACACCTCCACAAGCTCCTTCCCCATTATATTCTCCTCCAAATGTTCCAAAATCTCCATCTCCTAGTGTTCCAAATGCCCCTCTTGAAGCTCCTTCTCCTAGTACTAACACTCCTTATGTTCCAACTCCCACAAAAACACCCTCTCCTATTTCTCAACCTCCCTATGTACCAACACCTCAAAACACTCCTTCTCCTACTAATCAACCACCATATATATCAACACCTCCAAAAACTGCTTCACCCATTTCTCAGCCTCCAAAAAGTGGTTCCCATATTTCTCAACCTCCCTATGTTCCAACACCTCCAAAAGCTCCATCCCCCATTTCTCAACCTCCAAAAACTACTCCTTCTCCTATTTCTCAACCACCCTATGCACTAACACCTCAAAATAGTCCTTCTCCATTTTCACAAGCACCTTATACTCAATCTCCAACTCCATCAAAGTCCACTTCTCCTATCTCTCAACCTCCACTATCAGCACAAACACCAAGAGGTAACAGCATCATTGCACCATCTCCATCACCAACAGTTCCATCTCCATCACCAACATCCTCAATACCCATTTCACCATCACCATATGCTAACTCTCCATCTTCACTTTCTCCATCACCTTCACCTTCTGTTCAAACTCCGACAACCTCTCCGGTCTCCGATACTTCTCCGACACCATCATCGCCTCCGTCATCGTCGTTGAGTCCCGGAGGTTCCGCAACAACACCGTCCACGTCGTCGTCAAATGAAACGGCACCAGCTCCGCCAAGCCGTACGTCGTTTGCATGGGTTGCGACGCCATCAGGGTTATGGGTATATTCAGTTACTATTATAGTTGGTTTTTCTCTCACTACTATTCTTGGGTAG 1383 0.4375 MKIQRLIYLLLVLFSFISSSQAYKFYVGGKYGWVINHSEDYNPWAERNRFQVGDSLIFKYEKGSNSVLEVNKDDYEKCYKKNPIKKFEDGNTEFQIDRSGPYFFISGKDDNCEKGQKLIVVVLAIRPPPPQTPSPSVPSPYVSAPPKAPYVPTPPKSSSPSQAPSIPKAPSPYVPTPPQAPSPLYSPPNVPKSPSPSVPNAPLEAPSPSTNTPYVPTPTKTPSPISQPPYVPTPQNTPSPTNQPPYISTPPKTASPISQPPKSGSHISQPPYVPTPPKAPSPISQPPKTTPSPISQPPYALTPQNSPSPFSQAPYTQSPTPSKSTSPISQPPLSAQTPRGNSIIAPSPSPTVPSPSPTSSIPISPSPYANSPSSLSPSPSPSVQTPTTSPVSDTSPTPSSPPSSSLSPGGSATTPSTSSSNETAPAPPSRTSFAWVATPSGLWVYSVTIIVGFSLTTILG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0166 460 MobiDBLite consensus disorder prediction 270 304 - -
Lan19g0166 460 MobiDBLite consensus disorder prediction 209 257 - -
Lan19g0166 460 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lan19g0166 460 PANTHER BLUE COPPER PROTEIN 1 320 IPR039391 GO:0009055
Lan19g0166 460 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Lan19g0166 460 Gene3D - 21 125 IPR008972 -
Lan19g0166 460 MobiDBLite consensus disorder prediction 348 362 - -
Lan19g0166 460 CDD OsENODL1_like 23 123 IPR041846 -
Lan19g0166 460 MobiDBLite consensus disorder prediction 305 347 - -
Lan19g0166 460 MobiDBLite consensus disorder prediction 404 432 - -
Lan19g0166 460 MobiDBLite consensus disorder prediction 363 394 - -
Lan19g0166 460 MobiDBLite consensus disorder prediction 130 432 - -
Lan19g0166 460 MobiDBLite consensus disorder prediction 130 203 - -
Lan19g0166 460 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 320 - -
Lan19g0166 460 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0166 Lan-Chr19 1461806 1463676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0166 1 138 Phytocyanin Superfamily AT4G27520 48.592 3.75e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0166 - - lang:109334791 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0166 19 1461806 1463676 Lan5g0921 5 22234186 22236870 LSH