Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0165 ATGGTGCTGCTAAGATGCTTCTATGTGACACTTCTGCAGTGGTGTTTCTTGGCATGCTTACTTCACTTATCTCTGGGTCTTAGTAACCAAGAGACATCATGTGACATTCATGATTTATCAGCCCTTAAGGAATTTGCACACAACCTTACTAAAGGCTCTATCATAGCAGCATGGTCCAATGATACAATATGCTGCAACTGGGTTGGAGTTGTTTGTGATAATGAAACTGGTGGTGGAAGAGTGACCAAGTTGGTTCTACCTGGAATGGATCTCAATGGAACAATTTCACCTTCTCTAGCTCAGCTAGATCAGCTCATTTTGCTGAATCTCTCATTGAATCATCTTGTTGGTGAAATCCCTATAGAGTTCACCAAGTTGAAGAAGTTGAGGTTTCTTGACTTGAGCCATAATGTGCTGTCAGGAGAAGTTGGTGGTGCACTTTCTGGTTTGCAATCTATTGAAGTATTGAATATTTCTAGCAATTTGTTTTCTGGTGACCCATTCTTTCAACTTGGAGAATTCCAACATCTCCTTGCTCTCAACATGAGTAACAATTCATTCACTGGCAGGTTCAGTTCTCAAATTTGCAGTGCTACCAAGAACCTTCACACCCTTGATTTATCTGAAAATCACTTTTTTGGTGATCTTGAAGGCTTGGACAATTGCAGCACATCTCTCCAACTGTTGCATTTGGATTCCAATTCATTTTCTGGTTCTCTTCCAGATTCCTTGTACTCAATGTCAGCCTTAGAGCAATTTTCAGTATCTGCCAACAATTTATCTGGTAATTTAAGCAAAGAACTGAATAAGCTTTCTAGATTAAAAGCTCTATTGGTTTCTGGTAACCAGTTTTCAGGGGAACTTCCAAATGTGTTTGGGAACCTTTTGCAGCTAGAACAATTAGTAGCACACTCCAATTTAATTTCTGGATCTTTACCTTCCACTTTGGCTTTATGCTCAAAGCTTAGAGTGATTGATCTTAGAAATAATTCCTTGTCTGGTACTATTGATCTTGATTTCACTATGTTGTCTAATCTTCACACACTTGACCTTGCTAGTAATCATTTTATTGGACCACTTCCAAGTTCCTTGGGTAATTGCCGCGAATTGAAACTTTTAAGCCTTGCTAAGAATGGTTTAAATGGCTCTATCCCTGAAAATTATGCCAACCTCACTTCTCTTTCATTTGTGTCCATGTCAAACAACAGCTTAGAGAACTTGTCTGGGTCATTGTCTGCTTTGCAGCATTGCAAAAACCTCACCACTCTTATCCTCACCAAGAATTTCCATGGTGAGGAAATTCCAGAAAGCCTAGTAGCAGGATTTGATAGCCTTATGGTTTTGGCACTTGGAAATTGTGGCCTTAAAGGCCATGTTCCTTCTTGGCTGTCGAACTGCCGGAAGTTGGGAGTCCTTGATTTGTCTTGGAACCATCTGAATGGTAGCATTCCTTCATGGATCGGTCGAATGGACAATTTGTTCTACTTGGATTTCTCAAACAATTCTCTCACAGGAGAAATACCAAAAAGTTTGACAGAGTTGAAGGGCCTTATTACCCCAAATTGCAGCAGATCAAATTTCACTCTATCCGCGGGCATTCCTCTTCTTGTCAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCAGGCATCAAGTTTCCCTCCTTCAATATACTTGAGCAACAACAATTTAAGTGGAAATATATGGCCTGAAATTGGTCAATTGAAAGCACTGCATGTCTTGGATTTAAGCCGGAACAACATCACCGGTACCATTCCTAGCTCTATTTCTGAGATGGAGAACTTGGAAACATTGGATTTATCTTATAACGATCTCAATGGAAAAATTCCTCTGTCGTTTAACAACCTCACATTCTTGTCAAAGTTCAGTGTGGCGTATAATCGCTTGCAGGGATCAATTCCAACCGGTGGGCAGTTTTTAAGTTTCCCTAGTTCAAGCTTTGAGGGCAACCTGGGCCTTTGTAGGGACATTGATTCTCCTTGCAAAAATGTAAATACAGGGGAGTTGAGACCTAATATTTATTCTGGTTCTGCCAGAAAGTTTGGTAAAGGCAATGTACTTGGCATAACAATTGGCATCGGCGTAGGGCTTGCACTGCTTCTAGCAGTTATCGTGCTAAAAATGTCAAAGAGGGATGAGGATAAGCCAATTGACAACAATGATGAGGAATTCAGTAGCAGGCCACACAGGTTATCTGGAGCACTTGTTTCCTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACAGTTTCAGATTTGTTAAAATCCACAAACAATTTCAACCAAGCAAATATTGTTGGTTGCGGTGGATTTGGTCTTGTCTACAAGGCTAATCTTCCAAATGGCACAAAAGCAGCTATCAAAAGACTTTCTGGGGACTGTGGTCAGATGGAACGTGAATTCCAAGCTGAAGTCGAGGCCCTCTCAAGAGCTCAACACAATAATCTTGTTTCTCTTAAAGGTTATTGTCGGCATGGCAACGACAGATTGCTGATATACTCATACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAGTTCAGCTCTAACTTGGGATGTGAGACTCAAGATCGCACAAGGCGCTGCTCGTGGATTAGCTTACTTGCACAAGGGGTGTGAGCCGTACATAGTGCATCGAGATGTAAAATCTAGCAACATACTGTTGGATGATAAGTTCGAAGCTCATTTGGCTGATTTTGGTCTCTCAAGGCTACTTCAACCTTATGATACTCATGTCACAACAGATTTAGTAGGGACATTAGGATACATTCCACCAGAATATAGTCAAACAATGACAGCAACCTTCAGAGGTGATGTTTATAGTTTCGGTGTTGTTCTTCTCGAGCTTCTTACTTGTAGAAGGCCTGTAGAAGTCATCAAGGGGAAAAATTGCAGGAATCTTGTTTTTTGGGTGTTTCAGATGAAATCTGAGAATAAAGAGCAGGAAATCTTTGACCCAGCCATTTGGCATAAGGATCATGAGAAACAGCTTTTGGAGGTGCTGACCATTGCTTGTAAATGTCTAGACCAAGATCCAAGGCAGAGACCCTCCATTGAATCAGTTGTTTCATGGCTTGATGGTGTAAGTTTAGATGGCCCTCAACAGTGA 3159 0.4096 MVLLRCFYVTLLQWCFLACLLHLSLGLSNQETSCDIHDLSALKEFAHNLTKGSIIAAWSNDTICCNWVGVVCDNETGGGRVTKLVLPGMDLNGTISPSLAQLDQLILLNLSLNHLVGEIPIEFTKLKKLRFLDLSHNVLSGEVGGALSGLQSIEVLNISSNLFSGDPFFQLGEFQHLLALNMSNNSFTGRFSSQICSATKNLHTLDLSENHFFGDLEGLDNCSTSLQLLHLDSNSFSGSLPDSLYSMSALEQFSVSANNLSGNLSKELNKLSRLKALLVSGNQFSGELPNVFGNLLQLEQLVAHSNLISGSLPSTLALCSKLRVIDLRNNSLSGTIDLDFTMLSNLHTLDLASNHFIGPLPSSLGNCRELKLLSLAKNGLNGSIPENYANLTSLSFVSMSNNSLENLSGSLSALQHCKNLTTLILTKNFHGEEIPESLVAGFDSLMVLALGNCGLKGHVPSWLSNCRKLGVLDLSWNHLNGSIPSWIGRMDNLFYLDFSNNSLTGEIPKSLTELKGLITPNCSRSNFTLSAGIPLLVKRNKSASGLQYNQASSFPPSIYLSNNNLSGNIWPEIGQLKALHVLDLSRNNITGTIPSSISEMENLETLDLSYNDLNGKIPLSFNNLTFLSKFSVAYNRLQGSIPTGGQFLSFPSSSFEGNLGLCRDIDSPCKNVNTGELRPNIYSGSARKFGKGNVLGITIGIGVGLALLLAVIVLKMSKRDEDKPIDNNDEEFSSRPHRLSGALVSSKLVLFQNSDCKDLTVSDLLKSTNNFNQANIVGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHNNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDESSALTWDVRLKIAQGAARGLAYLHKGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTMTATFRGDVYSFGVVLLELLTCRRPVEVIKGKNCRNLVFWVFQMKSENKEQEIFDPAIWHKDHEKQLLEVLTIACKCLDQDPRQRPSIESVVSWLDGVSLDGPQQ* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0165 1052 CDD STKc_IRAK 777 1044 - -
Lan19g0165 1052 SMART serkin_6 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0165 1052 Gene3D Transferase(Phosphotransferase) domain 1 847 1049 - -
Lan19g0165 1052 Gene3D Ribonuclease Inhibitor 37 151 IPR032675 -
Lan19g0165 1052 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Lan19g0165 1052 Gene3D Ribonuclease Inhibitor 167 404 IPR032675 -
Lan19g0165 1052 SUPERFAMILY L domain-like 60 334 - -
Lan19g0165 1052 SUPERFAMILY Protein kinase-like (PK-like) 753 1042 IPR011009 -
Lan19g0165 1052 ProSiteProfiles Protein kinase domain profile. 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0165 1052 Gene3D Phosphorylase Kinase; domain 1 737 846 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 614 1045 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 276 434 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 440 505 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 559 617 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 153 262 - -
Lan19g0165 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 155 - -
Lan19g0165 1052 SUPERFAMILY L domain-like 267 648 - -
Lan19g0165 1052 Pfam Leucine Rich Repeat 345 367 IPR001611 GO:0005515
Lan19g0165 1052 PRINTS Leucine-rich repeat signature 129 142 - -
Lan19g0165 1052 PRINTS Leucine-rich repeat signature 600 613 - -
Lan19g0165 1052 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Lan19g0165 1052 Pfam Protein kinase domain 772 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0165 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Lan19g0165 1052 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Lan19g0165 1052 SMART LRR_typ_2 126 149 IPR003591 -
Lan19g0165 1052 SMART LRR_typ_2 391 414 IPR003591 -
Lan19g0165 1052 SMART LRR_typ_2 576 600 IPR003591 -
Lan19g0165 1052 SMART LRR_typ_2 271 294 IPR003591 -
Lan19g0165 1052 SMART LRR_typ_2 490 514 IPR003591 -
Lan19g0165 1052 SMART LRR_typ_2 343 367 IPR003591 -
Lan19g0165 1052 ProSiteProfiles Leucine-rich repeat profile. 201 223 IPR001611 GO:0005515
Lan19g0165 1052 Gene3D Ribonuclease Inhibitor 405 676 IPR032675 -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 276 434 - -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 559 617 - -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 440 505 - -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 155 - -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 614 1045 - -
Lan19g0165 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 153 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0165 Lan-Chr19 1445394 1449791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0165 1 1048 Receptor kinase-like Gene Family AT1G55610 33.592 1.51e-168 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lan19g0165 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0165 - - gmx:100797812 1657.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0165 19 1445394 1449791 Lan5g0919 5 22209046 22213099 LSH