Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0163 ATGGAAGCTAGGAGTATAGAGAGGAAGAGATCAATTGAGAAGGTGAGGAACATAGTTGAAGAAGTACAAGATGAAGTTGAAGAGGAAGATGAAGGTGGTGGTTGTGGTTGTGATGAGAAGAAGAAAGGTGCTAGTGGGAAAAGAGGGTTAAGTGGTGGTGGTGGTGGAGGAGGATTTTCTCTACCTTCATGTCAAGCTGAGAGGTGTGGTGCTGATTTGACTGATGCAAAGAGGTACCACCGCCGACATAAGGTGTGTGAGTTTCATTCCAAGGCACCTATTGTGGTGGTTGCAGGTTTCAGGCAAAGGTTTTGCCAACAATGTAGCAGGTTCCATGACCTAGCTGAGTTTGATGAAGCTAAAAGAAGCTGCCGGAGACGCTTGGCCGGACACAACGAAAGGCGTCGGAAAAGCAATGTAGAAATGTGCAATGAGGGTTGTAACCGTGGCAAAGGGCAGCAGGAACAACAGACAAATGAGAGGGGAAGAATTCAGATGAACATGGGAGAGAGTTGTGGCTACAAGTCTTTTCATATCAGATGA 543 0.4641 MEARSIERKRSIEKVRNIVEEVQDEVEEEDEGGGCGCDEKKKGASGKRGLSGGGGGGGFSLPSCQAERCGADLTDAKRYHRRHKVCEFHSKAPIVVVAGFRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKSNVEMCNEGCNRGKGQQEQQTNERGRIQMNMGESCGYKSFHIR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0163 180 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 14 180 IPR044817 GO:0003677
Lan19g0163 180 Pfam SBP domain 64 137 IPR004333 GO:0003677
Lan19g0163 180 Gene3D - 55 125 IPR036893 GO:0003677|GO:0005634
Lan19g0163 180 Coils Coil 12 32 - -
Lan19g0163 180 ProSiteProfiles Zinc finger SBP-type profile. 61 138 IPR004333 GO:0003677
Lan19g0163 180 MobiDBLite consensus disorder prediction 19 52 - -
Lan19g0163 180 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 180 - -
Lan19g0163 180 SUPERFAMILY SBT domain 62 142 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0163 Lan-Chr19 1437893 1439226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0163 58 166 SBP-box Gene Family AT1G53160 64.286 1.40e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan19g0163 SBP 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0163 - - aprc:113864686 223.787