Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0162 ATGGTGGGCTCAGGAGCAGATAGGAGCAAAGAAGCTGTAGGGATGATGGCCCTTCATGAGGCCCTTAGAACCATCTGTCTTAACTCAGACTGGACTTATTCTGTTTTCTGGACTATCCGTCCGCGCCCGAGAGTCAGAGGTGGTAATGGCTGCAAGGTTGGTGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGTCAAGGAAGAGGTTCAGGTTGTGTTGAAGATATTGATGGAGAGGATCTTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAGCCAAATATCTCTAACTACTGGCAGAGTTCCTTTGATGCTCTTCCTCCTGAATGGACTGATCAATTTGAGTCAGGGATACAGACCATAGCTGTAATTCAAGCTGGACATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTAAGAATGAGACACACATTTGAATCTCTAGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACTAGGAACAATTGTTCTTCTACTACTCCACTTCCTTCAAAACCATCCACCATTCCTATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAAAGGCCACTTGCTTCTACTAACTCTATGCTATCCTCACCAAATTTTCAACATGCTACTAGAATGGGTTTTCCACATGCAAAAGATGAGACTCAAATGTTTCTTATGCCTCATCATGCATCATCTGAGACTGCAAGAATTGAAGACATGATGGGAGATCAACATGAGAATGACATAAAATGGCCTAATGGATTGTCTTTCTTCAATGCTCTCACTGCAAGAACAGAAGATCATCATAAGCTTTTGTTTAATCCAGATAGCTTGGGGAACAAGCAAGGTGATCATAATCATAATCATAATCATAATCATCATTCAGATGCATGCAACAACATGCATAATGGTAGTGGAACAAATCCAAATGAGTTCTTGAGTTTGGATAGTATTAGTCACCATAATGAAGGTGCAAAGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTACCAACAAGAGTGGCTTCATCATCTTCATCTACTTCAATGGATCAACATCAACAACAAGGTGTGGAGTATAGGAATAATTCTGAAGGAGGAATGTACCCTGATGTTATGGAAACCTTTTTGGAGTGA 1266 0.4155 MVGSGADRSKEAVGMMALHEALRTICLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCQGRGSGCVEDIDGEDLVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNNCSSTTPLPSKPSTIPIRPPPPLFNWGQRPLASTNSMLSSPNFQHATRMGFPHAKDETQMFLMPHHASSETARIEDMMGDQHENDIKWPNGLSFFNALTARTEDHHKLLFNPDSLGNKQGDHNHNHNHNHHSDACNNMHNGSGTNPNEFLSLDSISHHNEGAKKMDKFKRSFTLPTRVASSSSSTSMDQHQQQGVEYRNNSEGGMYPDVMETFLE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0162 421 PANTHER GB|AAF34833.1 1 421 - -
Lan19g0162 421 MobiDBLite consensus disorder prediction 322 358 - -
Lan19g0162 421 MobiDBLite consensus disorder prediction 381 405 - -
Lan19g0162 421 MobiDBLite consensus disorder prediction 340 358 - -
Lan19g0162 421 PANTHER GB|AAF34833.1 1 421 IPR044170 -
Lan19g0162 421 MobiDBLite consensus disorder prediction 381 412 - -
Lan19g0162 421 MobiDBLite consensus disorder prediction 325 339 - -
Lan19g0162 421 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 186 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0162 Lan-Chr19 1433590 1436469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0162 19 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.846 1.26e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0162 - - gmx:100814723 683.715