Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0161 ATGGCTGATTTAGCGGGTCTAGCCGAGGCAGCAGGGTCAAGATTCACTTCATTGGAGCTTATCGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCTATCAAAGTGATCGATTTGGAAGAGTCTGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTTTCACAATGTCGATCTCAATACATTACTGAGTATTATGGTTCCTATCTCAACCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCAGATCTACTCCAATCAGGCCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGATTTGCTGCATGCCATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATCTTATTGAATGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTATCAAGGACTATATCGAGGAGAAAGACGTTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTAGGGATCACTGTCATCGAGATGGCCAAAGGGGAGCCTCCCCTTGCTGATCTGCACCCTATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCACCGCAGCTGGATGAGCATTTTTCTCGTCCCTTGAAAGAATTTGTTTCGTTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTTAAACACCGCTTCATTCGGAATGCTAGGAAGAGCCCAAAGCTTTCTGAAAGAATAAGGGAACGTCCTAAATACCAAATAAAGGAAGATCAAGAAACACCTAAAAATGGCCGGAGAGGGATGGGGGAGGCCTCTGATACTATGAAGGTGGCAAGAGATTCAAGAGGTGAAGAAACTAATCGACCCATTGATCAGGGTAAAACCATGAAAAATTCTGGATGGGACTTTAGCATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTTGCACGACCACCTCAATTTAGAGATAAGAAAACTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCTCCTGACAGTGGCTATCAAGGGGCGTCTGACAATAGAAGTGCACTTAATGAATCACTTGAAAGTTCCTTTGGAAAAGATCCTAGAGTTTCCTATCATGATGAGCATCTGGCTAATCTTGAAGATGATGAATATTCTGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGTCATCGGTGCTTCGTGACCAGAGCTCTCAGTCTAGCAGCAGCTATACTTCTTTTGAAGATACTTCTACCACTGGAACTGTTGTTTTTCGTAACCAGCGTGATGATTCTGGTTCTCCAGAGACATCAAGTTCCCGAGACGGACTTCATGACAGAAATTCAAATACCTCATTGGAAGACAGTGCTGCAAATCTTGCTGAGGCAAAGGCAGTTATCCAAGGAGGACTAAGGAAAGGCAATGCTCGTGAGAGATTTGCACTGGGGAAAAACATCAATCAACAAGAAAGCAAGAGAGAAATGACGAGTAGCTCTGGTTCTTCGAGATCATCATCACAAAAGGGCATGCCAAGATCACATTATTCTAGTGGTGATGAAGAAAGTGCTAAAATAATGTCATCCTCTGTGCCGTTATCAGTTTTGCTTATTCCTTCACTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCAATCTTGGGAGCAGTTATCAATTCTCTTGTAAACATGGAGAGCACAAAGCCTCGATCCTCCGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAATGAAGATTCATTGAAAGATTTGCAGGAATTGGCAGGCCAACTATTCAGCAAGACCAAGTCAGGTGATACAGAGTCTGATAGCATCAGGAAACAACAGAATAAGGAACTTCATCCAAATACCAACTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCCATCTTGA 2064 0.4264 MADLAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSQYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLNENGDVKVADFGVSAQLSRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITVIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKHRFIRNARKSPKLSERIRERPKYQIKEDQETPKNGRRGMGEASDTMKVARDSRGEETNRPIDQGKTMKNSGWDFSIGGSQGTGTFRSVARPPQFRDKKTEVSHNQLTQRKAPDSGYQGASDNRSALNESLESSFGKDPRVSYHDEHLANLEDDEYSGSGTVVIRSPKGSRSSVLRDQSSQSSSSYTSFEDTSTTGTVVFRNQRDDSGSPETSSSRDGLHDRNSNTSLEDSAANLAEAKAVIQGGLRKGNARERFALGKNINQQESKREMTSSSGSSRSSSQKGMPRSHYSSGDEESAKIMSSSVPLSVLLIPSLKEAIADDPEGSILGAVINSLVNMESTKPRSSDVLVKKLLQRLASSNEDSLKDLQELAGQLFSKTKSGDTESDSIRKQQNKELHPNTNLSPLARFLLSRWQGQTSRDLNPS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0161 687 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lan19g0161 687 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 685 - -
Lan19g0161 687 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0161 687 MobiDBLite consensus disorder prediction 519 550 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 400 415 - -
Lan19g0161 687 CDD STKc_MST3_like 13 287 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 273 488 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 306 325 - -
Lan19g0161 687 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0161 687 MobiDBLite consensus disorder prediction 273 300 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 425 476 - -
Lan19g0161 687 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 685 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 638 666 - -
Lan19g0161 687 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0161 687 MobiDBLite consensus disorder prediction 326 350 - -
Lan19g0161 687 Gene3D Transferase(Phosphotransferase) domain 1 12 302 - -
Lan19g0161 687 MobiDBLite consensus disorder prediction 368 394 - -
Lan19g0161 687 Coils Coil 41 68 - -
Lan19g0161 687 SUPERFAMILY Protein kinase-like (PK-like) 12 294 IPR011009 -
Lan19g0161 687 MobiDBLite consensus disorder prediction 517 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0161 Lan-Chr19 1404271 1425559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0161 1 684 MAP Kinase Kinase Kinase Kinase AT3G15220 64.841 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lan19g0161 Pkinase 9.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0161 K08838 - gmx:100814188 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0161 19 1404271 1425559 Lan5g0916 5 22186881 22198682 LSH