Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0157 ATGCGATCCGGTTCGTCGTTGGAGGAGAGCAACACTGGTCGATCGTTGCGGCTTCGGAAGAAGCACAAAAGGTTGGATGCAATATACGAGGAGGAGTACAATCGGAACAATGGTGAGTTCAATGAGGATGATGATAATGATAACGATGATGATGCTTTGAATCATGATGTAGGAGTTCGCCGCAGTTCCCGCGTTCGGCGTGCCCCTGTTTTGCTAGATGCTTCTCCTCCTCCACCGAGGAAACGGCAGAGGTTAGGGGAGAGTGGAATGCAGAGGGGCGTTGAGAGCGTCAAGACCTTAGAGAGGGAAAATGGGAGTTCTAACGTTGGGGCAGAGAGTCCGGGGACTTGGAATTCAAGATTGAGATCGAGGGTTAGGAATGCAGGTGTCGATGTGAAGGAGAAGAGGGAATCTAGGGTTAGGAATGTAGGTTTTGAGGTAGAGAGGGAATCGCGCCGTGGGAAAAGGAAGCTTTTTGAGGATGTGGTTGGAAGTGTGGATGATGATGAGCTGAAGGTTGCAGAGGTAGATGACAAAGAGGATTTGGATGTAGATAACAAAGAGGAATCGGAAGGTTCCATAAGGGAGATAGTTAAGTCAAAGAGACTGGAGAGGATCAATGTCATAGAGATTGAGTCTCGTGGCAGTGTAGATGAGAGTAAGAGTCAAGAAGTGGAGCTTGTATTGGATAAAGATAATGATGAGGAGAGTGCTTCAATTCCAGAAAACGAGTTGTCTGGAATGAAAGACATTTTGGATGGAGATGCCCCTCCCTTGTTAGAGAATAAGGAGAGAAATGAATCTAACATTTTTCAAACAGAGGAGTGTGGTGGAGGTAATGAACCATCTCTGGTGGAATGTGTCGATATACCGGATGATCTGTTGGAGAGTGTGAAGGAAGGGCAAAATGCTAGTGATGTAGCTGAAGTTGTGCCAAAGAATGTAGAAATTGAAGGATCTGTTGATAAGGAGGTTGGCATTGATAGAAATGACTTGAAAGGTGCAAATGTTACAAGGATGGGTGAGTTGAAACATGCTTCGAATGACGAGCCTGGTCTCCGACGTATCAAAGAGGGTAGACGGTGTGGTTTGTGTGGCGGAGGGACTGATGGTAAGCCTCCAAAAAGGCTAGTTCATGATAATGGCGAGAGTGAGAATGAAGCATATAGCGGGTCTTCCGCTTCAGAGGAGCCTAATTATGATGTCTGGGATGGTTTCGGTGATGAACCTGGCTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCGCGATGGTATTGCTAGAATCTGGGTGCATCTGCTCTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGTTGCTTAAAAAATGTGAGAGCTGCACTTTGCAGAGGAAGAGCATTGAAGTGTAGCAGTTGTGGGAGGCGAGGAGCAACCACTGGTTGTCGCGTCGACCGTTGTCCAAAGACTTATCACTTGTCTTGTGCAAGAGCAAATGGGTGCATCTTTGATCATCATAAATTTCTTATAGCCTGCACAGACCATCGGCATCTCTTCCAACCCCGTGGTAATAAATATCTAGCTCACATGAGGGCTAAGAAAATGAAGTGGGAGATGAAAAAGCGTTCAAATGATGCTTTGAGAAAGGATATTGGCGAAGAAGAAAGATGGTTGGAAAATTGTGGTGAGGATGAAGAATTTTTGAAACGAGAGAGCAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTGTTTACATTGGAGATTCAGACTCGACCTCTGAAAAATCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGCTGTATGAAAGAAGTTGTTATTTTGCCTCTACTATATCCCGAGCTCTTTGATAATTTAGGGCTTACACCCCCAAGAGGTGTTCTTCTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTTCGAGCATTGATAGGTGCATGTGCTCGTGGCAATAAACGGATTGCTTATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTGGGAGATTCTGAGCGCCAACTAAGACTGTTATTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATTGATGGACTTGCACCCTGCCGTACTAGGCATCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGATCAGTGGTAGTCATAGGGGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTTAGGCGGCCTGGAAGGTTTGATAGGGAAATTTATTTTCCATTGCCATCAGTCGAGGACAGAGCTTCCATTCTCTCAGTTCACACCCAGAAGTGGCCAAAACCAATTAATGGTTCATTGCATGAGTGGATTGCAAGAAAAACTCTTGGCTATGCTGGTGCAGATCTCCAGGCTCTCTGTACTCAAGCAGCCATCAATGCTTTGAAAAGGAATTTCCCTTTGCAAGAAGTGCTGTCTGTAGCTGAAGAAAAACATGCTGGTTCCAAACACCTTCCTCTTCCATCCTTTGCAGTGGAGGAGAGAGATTGGCTAGAGGCTTTTCTACGTTCCCCACTACCGTGCTCCCGGAGAGAAGCCGGAAATGCTGCTAATGATGTAGTATGCTCCCCTCTTCCCATCCACCTCATTCCTTGTCTATTGCGGCCACTGTGCACACTTCTTGTATCTCTTTATCTTAATGAACGTCTATGGTTGCCACCTCCTATATCTAAAGCTGTAACAATGATTAAGGCTGTAATTTTTTCTGCTCTTGACAAAAAGAAAATGCCTAGTCATCACTGGTGGTTGTACGTTGATGATTTTCTTCAAGAAACCCATATTGCTTCGGAGGCAAAGATGAAGCTTGCTTGTTCTGGCATTTTATCTGTGACCGATTGCTTTACTGATTTTCATGATGCTGTGGATGATACTGATGATGGTGTGGTGAAGGTTGAACCCTCCATGAAGAACAATGTTAATATGCGTAAATGTCTATTGCCAAACATGTCATTTGGATTGACTAACCAATCAGGATTTCGGATACTGATTTCTGGAAATACACGATCTGGCCAGAGACATCTTGCTTCCTGCCTTCTTCACTGCTTTAATGAGAATCTTGAAATACAGAAGATTGATATGGCAACTATTTCACAAGAAGGACATGGAGATGTAGTGCAAGGGATTGCACAAATATTAATGAAATGTGCCAGTTTGCGATCATGCATAGTATTCATGCCAAGAATTGATCTGTGGGCTGTGGAGAAACATTTCCAAATTGATGAAAAGACTGATTCCTGCTCAACGACTCGTCTATTACCCGGGAATGAAAAATCTTGTTTCACATCAAGCCAAGATGAGAAGGAAATCAAGTTAAATACTAAGAAAAACTCAGAAAATGTGACCAATGGCCAAGCCAACATAAAGGCATCACGTGCCTGGATGTCATTTATTCAGCAGGTGGAGTCTATTGGTGTATCCACATCCTTGATGATTCTGGCTAGTTCAGAAGTTCCGTATGCAGAATTTCCAAGTAAAATCAAGGATTTCTTTCAGACTTATCAATGTAATGGCGACCGATCAATTCCTTTGGAGCAGACAGTTCCTCGATTCTCTCTGCAGGTTGATGGGAATTTTGATCATGACATGGTCATCAATGTATCTGCAGCAGAGGTATTGAGAAATTTAGTTGAGCAGCAGGTTCAACTGATTCATAAGAGATCTCATGCTCATATAGGTGTTCTAAAGGGCTATGGAGCCTATGATTCAATTGAAATTTGTAAAGACAAGGTATGTAAGAGAAAAGATAATGTCTCAACTAATGAAAAACAGAGTCAAATCCAACTTCCCGAGTCCCTTACAAAAGTTACACCAACATCTAACAGTAGGTCGTTGAAGGGAAAATCAACCCTTTTGTCGGCAATATCCACATTTGGCTATCAAATTCTTCTATACCCACATTTTGCTGAACTTTGTTGGGTCACATCAAATTTCAAAGAAGGTCCTTGTGCTGATGTGAATGGACCTTGGAGGGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAACAATTCACAAGACGAGGTGGTTGTTTCTTGTAGCTCTGGTGGCATCAAAAACAAAGAAAGATCCGGTATAGTCAGAGGTTTGATTGCTGTTGGTTTATCTGCATATAGAGGCGTTTATAAATCAGTGAGGGAAGTTTCTTGTAATGTAAGGAAGGTTCTTGAGATCTTAATCGAACATATCAATGCAAAAATTCAAGCAGGGAAAGACAGACATCAATATCTTCGTATTTTGTCACAAGTGGCTTATTTGGAAGATTTGGTCAACAACTGGGCTTATGCATTGCTGAGTCTGGAGCATGATTCCCCCGAGCTTGCGCAAAAGGTTACGCCAGCAACTGTTGGATCATTAGATAGTCATCTCAGATGTGAAGATCACCAAACTGAACCTGAGGACTGTCATTTGGTTGTTCCTAAGAATGGTGATGATTTGAAAGGTCATAAGGGAATTGTGGCTGAAACGACTGGCTCTATTGCCTTGAATGGCAAAAATGATAATTCAGATAATCTTGATCCAATTGCTCAAAATGCAACTTCTGAAGGATCTCTACAGAACCATGATTTATCAGATAAGCATATTAACAACACTGCTTCTTCCAACCAACCTGTTGATCCATCCATAAATCAAGAGAGTAGGTTACCATTTGGACTATCTGAATCAGTAGCTGTCTGTGAACAAGAGGGTGTTGAGTTAGGTAACTCCAACACAATCTCTAATAAGCCTCTCAGCTCGTCCTCGGTAGAGACTGGTGTGAAATTAAGTGATGGCAGTGATCACGGCAAATCTGACAATGTTATCGATATTAACGTCGCTTCAAGTGAGGGCAGTTATCATGCGGAATCTGGGGTTATTTGCTTCTATCAATGTTGCCCTCGATGTATCTCCAATCTCTATCATTTGACACAGAAATTACTTCTTCGTGAGTATCGGCTGAATAACAGCCATTGGACAGTGGAAGATGTTCATGATTCAGTTGCATCATTATCCGTGGATCTTATTTCGGCACTCCGAAAATGTTATCTAGCTGAAGATTTCAGTGATTCATCTAACAAAACCTCAAGACATGAAGAGCATGGAAGAACATGCAATCCCTTAAACCAAGGGAAAGATGTTGTGCCAGCTGAATGTGTTTCTCATTCAACAATGCAAGATGCAACTGGAGGCAAAGATGAGGCACTGAATGAATCATTGAAGCTTGATTTGAAATTTATTTTCAAAGATGGTGTACTAATGCACATGGACCCAGACAAAGATGTCCCACTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTGTAAGGGAGTTGATAGAAATGATGAAGCAACCTTTTCATTAA 5421 0.4272 MRSGSSLEESNTGRSLRLRKKHKRLDAIYEEEYNRNNGEFNEDDDNDNDDDALNHDVGVRRSSRVRRAPVLLDASPPPPRKRQRLGESGMQRGVESVKTLERENGSSNVGAESPGTWNSRLRSRVRNAGVDVKEKRESRVRNVGFEVERESRRGKRKLFEDVVGSVDDDELKVAEVDDKEDLDVDNKEESEGSIREIVKSKRLERINVIEIESRGSVDESKSQEVELVLDKDNDEESASIPENELSGMKDILDGDAPPLLENKERNESNIFQTEECGGGNEPSLVECVDIPDDLLESVKEGQNASDVAEVVPKNVEIEGSVDKEVGIDRNDLKGANVTRMGELKHASNDEPGLRRIKEGRRCGLCGGGTDGKPPKRLVHDNGESENEAYSGSSASEEPNYDVWDGFGDEPGWLGRLLGPINDRDGIARIWVHLLCAVWSPEVYFAGLGCLKNVRAALCRGRALKCSSCGRRGATTGCRVDRCPKTYHLSCARANGCIFDHHKFLIACTDHRHLFQPRGNKYLAHMRAKKMKWEMKKRSNDALRKDIGEEERWLENCGEDEEFLKRESKRLHRDLLRIAPVYIGDSDSTSEKSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGNKRIAYFARKGADCLGKYVGDSERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRHQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSVEDRASILSVHTQKWPKPINGSLHEWIARKTLGYAGADLQALCTQAAINALKRNFPLQEVLSVAEEKHAGSKHLPLPSFAVEERDWLEAFLRSPLPCSRREAGNAANDVVCSPLPIHLIPCLLRPLCTLLVSLYLNERLWLPPPISKAVTMIKAVIFSALDKKKMPSHHWWLYVDDFLQETHIASEAKMKLACSGILSVTDCFTDFHDAVDDTDDGVVKVEPSMKNNVNMRKCLLPNMSFGLTNQSGFRILISGNTRSGQRHLASCLLHCFNENLEIQKIDMATISQEGHGDVVQGIAQILMKCASLRSCIVFMPRIDLWAVEKHFQIDEKTDSCSTTRLLPGNEKSCFTSSQDEKEIKLNTKKNSENVTNGQANIKASRAWMSFIQQVESIGVSTSLMILASSEVPYAEFPSKIKDFFQTYQCNGDRSIPLEQTVPRFSLQVDGNFDHDMVINVSAAEVLRNLVEQQVQLIHKRSHAHIGVLKGYGAYDSIEICKDKVCKRKDNVSTNEKQSQIQLPESLTKVTPTSNSRSLKGKSTLLSAISTFGYQILLYPHFAELCWVTSNFKEGPCADVNGPWRGWPFNSCIIRPNNSQDEVVVSCSSGGIKNKERSGIVRGLIAVGLSAYRGVYKSVREVSCNVRKVLEILIEHINAKIQAGKDRHQYLRILSQVAYLEDLVNNWAYALLSLEHDSPELAQKVTPATVGSLDSHLRCEDHQTEPEDCHLVVPKNGDDLKGHKGIVAETTGSIALNGKNDNSDNLDPIAQNATSEGSLQNHDLSDKHINNTASSNQPVDPSINQESRLPFGLSESVAVCEQEGVELGNSNTISNKPLSSSSVETGVKLSDGSDHGKSDNVIDINVASSEGSYHAESGVICFYQCCPRCISNLYHLTQKLLLREYRLNNSHWTVEDVHDSVASLSVDLISALRKCYLAEDFSDSSNKTSRHEEHGRTCNPLNQGKDVVPAECVSHSTMQDATGGKDEALNESLKLDLKFIFKDGVLMHMDPDKDVPLHCKFENLCLCSVRELIEMMKQPFH* 1807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0157 1806 MobiDBLite consensus disorder prediction 23 41 - -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 220 238 - -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 1595 1613 - -
Lan19g0157 1806 Pfam AAA+ lid domain 796 827 IPR041569 -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 366 400 - -
Lan19g0157 1806 Pfam PHD-like zinc-binding domain 432 511 - -
Lan19g0157 1806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 513 IPR013083 -
Lan19g0157 1806 SMART AAA_5 630 771 IPR003593 -
Lan19g0157 1806 ProSiteProfiles Extended PHD (ePHD) domain profile. 391 511 IPR034732 -
Lan19g0157 1806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 828 IPR027417 -
Lan19g0157 1806 Pfam ATPase family associated with various cellular activities (AAA) 634 769 IPR003959 GO:0005524|GO:0016887
Lan19g0157 1806 Gene3D - 595 769 IPR027417 -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 1543 1572 - -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 52 67 - -
Lan19g0157 1806 ProSitePatterns AAA-protein family signature. 739 757 IPR003960 GO:0005524|GO:0016887
Lan19g0157 1806 MobiDBLite consensus disorder prediction 1595 1619 - -
Lan19g0157 1806 PANTHER AAA DOMAIN-CONTAINING 56 1802 IPR045199 -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 220 261 - -
Lan19g0157 1806 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 56 1802 - -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 1 118 - -
Lan19g0157 1806 MobiDBLite consensus disorder prediction 100 118 - -
Lan19g0157 1806 CDD AAA 628 769 - -
Lan19g0157 1806 Gene3D - 770 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0157 Lan-Chr19 1373570 1381212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0157 596 831 Calmodulin-binding Proteins AT3G56690 42.437 2.27e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0157 - - gmx:100803849 2382.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0157 19 1373570 1381212 Lan5g0910 5 22141412 22148857 LSH