Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0152 ATGGGCGGCGAAGTCATAAAGAAGAAACCGAAGCCAACCCAAATGAACCCAAACTGGGTTCAACTCCAACAAAAACTGAAGCTGAATGCCCCTAAACCTTATTCAAGGAACTTCAAAAAATCAGAAGAAGATGACACCTCTAAATCAATATTGGGGAAACGTAAAGACAGGTCAGATGATGAATCAGATGACTCTGAGATTAATCCTCTTGCTCCTACAAATGATGATTCAAGTCTGACGGATGCAGTGGCTATGGATTGTGAAATGGTTGGTGTTGGTGAAGGAAACAAAAGTGCCCTTGGAAGAGTAACGCTGATTAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTTCGGCCACTGGAGCGGGTTGTCGACTTCCGCACTTTTGTTAGTGGCATAAGACCTCGGGATTTAAGAAAAGCGAAGGATTTGTGGTCTGCACAGAAGAAAGTGGCAGAGTTGATCAAAGGAAGGATCCTTGTAGGTCATGCCTTGCACAATGATCTTAAGGCGTTATTATTAAGCCATCCGAAAAAGGATATACGAGATACCTCCGAGTACCAACCATTTCAAAAGACAGGTAGCAGAAGAGCACTAAAGCATCTCGCAGAGGAAGTTCTCGGTGCTAAGATACAATCAGGAGAGCATTGCCCCATAGAAGACGCTCGTGCGGCCATGATGCTTTACCAAAGAAATCGAAAAGAATGGGAGAAGAGCGTAAAAGATCAGGTTCGGAACAAAAAGAAGCAAGGGAAAAGGAAGCAGAAAAAGAAGCCAAAGAATGAAGATGCTTCAAATGTCACCCAAGCTGGATATGAATCATTATAG 831 0.4284 MGGEVIKKKPKPTQMNPNWVQLQQKLKLNAPKPYSRNFKKSEEDDTSKSILGKRKDRSDDESDDSEINPLAPTNDDSSLTDAVAMDCEMVGVGEGNKSALGRVTLINKWGNVIYDEFVRPLERVVDFRTFVSGIRPRDLRKAKDLWSAQKKVAELIKGRILVGHALHNDLKALLLSHPKKDIRDTSEYQPFQKTGSRRALKHLAEEVLGAKIQSGEHCPIEDARAAMMLYQRNRKEWEKSVKDQVRNKKKQGKRKQKKKPKNEDASNVTQAGYESL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0152 276 PANTHER RNA EXONUCLEASE 4 30 258 - -
Lan19g0152 276 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 30 258 - -
Lan19g0152 276 MobiDBLite consensus disorder prediction 236 276 - -
Lan19g0152 276 MobiDBLite consensus disorder prediction 30 78 - -
Lan19g0152 276 Coils Coil 220 240 - -
Lan19g0152 276 SUPERFAMILY Ribonuclease H-like 82 236 IPR012337 -
Lan19g0152 276 SMART exoiiiendus 81 239 IPR013520 -
Lan19g0152 276 MobiDBLite consensus disorder prediction 36 64 - -
Lan19g0152 276 CDD REX4_like 83 231 IPR037431 GO:0006364|GO:0008408
Lan19g0152 276 Gene3D - 78 258 IPR036397 GO:0003676
Lan19g0152 276 Pfam Exonuclease 83 230 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0152 82 239 C2H2 Transcription Factor Family AT3G27970 37.356 2.42e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0152 K18327 - gmx:100819122 395.971